Ffus003551.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- Nfil3
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010000150.1:891002-892771[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-13 3.3e-10 40.6 3.1 2 54 174 226 173 233 0.94 2 2 0.022 28 5.6 0.0 43 63 548 568 542 569 0.73
Sequence Information
- Coding Sequence
- ATGGTCGCCGAGCTGGTGTCTCGACAGGGGGGCTCGCCCGTCAACGGCGAGACCCCCGGCAGCTCGCCGCAGCGGCTGAACAGCAACCCGGGCAGCCACCCGGGCCACCACCCCGCCAACGGCAACCCCGGCGCCCACCCGGGCCACCACCCCAGCGGGCCCACCATCACCGTCAACAGCGTgctcgcgcgcccgcccaccGGCCTCTTCTGCGCGGGGCCGCTCGCCGGGCCGCCCTCCGGCCCGCCCAACGGACATCCCAACGGTCACCCCAACGGACACCAGAACGGACACCAGAACGGACATCAGAACGGACATCAGAACGGACACCCCAACGGACATCCTAACGGACACCAGAACGGCATGGCCCCGGGCAGGATGTCGCCCAGCCCGCACGGCCCCCAGCACAACAACCACCCCCAGATGCAGGAGATGTCGCCCTCGTCGCGCAGCCAGTCGCCGGACAATGGCGCGTACCCGCAGCGCAAGCAGCGCGAGTTCATCCCCGACTCCAAGAAGGACGACAGCTACTGGGACAGGCGGCGGCGGAACAACGAGGCCGCCAAGCGGTCGCGGGAGAAGCGGCGGTTCAACGACATGATCCTGGAGCGGCGCGTCGTCGAGCTGTCCAAGGAGAACCACGTCCTCAAGGCGCAGCTGGCCGCCATCCGGGAGAAGTACGGCATCAACGGCGAGAGCGTGCTGAGCGTGGAGCAGGTGCTGGCCACGCTGCCGTCCAGCGACCAGGTCCTCGGGCAGGCCAAGCGGCCGAAGCTGgcctcgccgcaccccgccgcgccgcaccccacctccccgcaccccccgccgcacccgggcgCCGTGTCGCACCCGCTGCACCTGGCGCCCCACGGCGCGCTCCAGCCGCcgcaccagcccagccccatCCCCACCTCCGTGATCCACCAGCCGGtggcgcgctcgccgccgccgcccgcgccgctgcccggcctGCTCAGCCTCACGCCCCTGGCGCCCGTCGCCCCCGTGGGCGAGGACCAGGACTAcccgccctacccctaccccctgcccgccctgtacccggccggcccgcccggggccgcgcagcccggcgccggcgccgccgcggcgctcaaCCTGTCCCGCGGCGCCCGGGAGGAGCGCGGCCTGGAGAGGACCGGCCTGGAGAGGACCAGCCTGGAGCGCAGCCTGGAGCGGACCAGCCTGGAGCGCGGCCTGGAGCGGACCAGCCTGGAGCGCGGCCTGGAGCGGACCAGCCTGGAGCGCGCCCCCTCGCCCTACGAGCACGAGATgtcgggcggcagcggcgacgaGGCCACCCTCCACCAGCCGGCCGCCAACAACTGCCTGCCGCACAAGCTCCGCCACAAGTCGCACCTCGGCGAgaaggaggcggcggtggcgctccTGTCGCTGCAGCCTCTGCCCGCCATCAAGACGGAGGGCCACGGCCACCACGTGGCGCACCACGAGGCGgacagcgcgcgcgccagcccgcCCTGGGACGCGGAGGGCTCGAGCGACGAGAGGGACTCGGGCATCTCGCTCGGCGACTGCGGCTACGGCGGCGCCGaggcccggcacggcctcggacacggcctcggcccgctcggTCACGAGGGCCAGGATGACGCCGACGGCCACCTGAAGAGCGAGCTGGCGAGGCTCGCCTCCGAGGTCGCCTCCCTCAAGAGCATGCTGCACAAGGGCACGCTGccgtcgctgccgccgctgccgcccctgcagcagcccaaCGTCGCCCTGTACTGA
- Protein Sequence
- MVAELVSRQGGSPVNGETPGSSPQRLNSNPGSHPGHHPANGNPGAHPGHHPSGPTITVNSVLARPPTGLFCAGPLAGPPSGPPNGHPNGHPNGHQNGHQNGHQNGHQNGHPNGHPNGHQNGMAPGRMSPSPHGPQHNNHPQMQEMSPSSRSQSPDNGAYPQRKQREFIPDSKKDDSYWDRRRRNNEAAKRSREKRRFNDMILERRVVELSKENHVLKAQLAAIREKYGINGESVLSVEQVLATLPSSDQVLGQAKRPKLASPHPAAPHPTSPHPPPHPGAVSHPLHLAPHGALQPPHQPSPIPTSVIHQPVARSPPPPAPLPGLLSLTPLAPVAPVGEDQDYPPYPYPLPALYPAGPPGAAQPGAGAAAALNLSRGAREERGLERTGLERTSLERSLERTSLERGLERTSLERGLERTSLERAPSPYEHEMSGGSGDEATLHQPAANNCLPHKLRHKSHLGEKEAAVALLSLQPLPAIKTEGHGHHVAHHEADSARASPPWDAEGSSDERDSGISLGDCGYGGAEARHGLGHGLGPLGHEGQDDADGHLKSELARLASEVASLKSMLHKGTLPSLPPLPPLQQPNVALY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00732415; iTF_00732859;
- 90% Identity
- iTF_00732415;
- 80% Identity
- -