Focc014034.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- Nfil3
- Assembly
- None
- Location
- ML763031.1:219484-257945[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-13 3.3e-10 39.7 3.0 2 54 193 245 192 251 0.94 2 2 0.019 16 5.5 0.0 43 63 587 607 581 608 0.73
Sequence Information
- Coding Sequence
- ATGGTTGCCGAGCTGGTGTCTCGACAGGGGGGCTCGCCCGTCAATGGCGAGACCCCCGGCAGCTCGCCCCAGCGGCAGAACAGCAACCCGAGCAGCCACCCGGGCCATCACCCCGTCAACGGCAATCCCAGCGGCCACCTGAGCGGCCACCAGAGCGGCCCGACCATCACCGTCAACAGcgtgctcgctcgcccgccgaCCGGCCTGTTCTGCGCGGGTCCGCTCCCAGGGGCTCCCAACGGGCCACCCAACGGCCACCTCGCCGGGCACCCAAACGGACACCCTAACGGACACCCTAACGGACACCCTAACGGACTCCAAAACGGACACCAAAACGGACATCAGAACGGACATCAAAACGGACATCAGAACGGACACCAAAACGGACACCAGAACGGACACCAAAACGGACACCAAAACGGACTCTCGAATGCCATGGATCAAGGCAGGATGTCGCCCAGtccccacgaccaccaccagaTGCAGGACATGTCGCCGGGCTCGCGTAGCCAGTCTCCCGACAACGGCGCGTACCCgcagcgcaagcagcgcgaGTTCATCCCCGACTCGAAGAAGGACGACAGCTACTGGgacaggcggcggcggaacAACGAGGCGGCCAAGCGGTCCAGGGAAAAGCGGCGGTTCAACGACATGATCCTGGAGCGGCGCGTCGTCGAGCTGTCCAAGGAGAACCACGTCCTCAAGGCGCAGCTCACCGCCATCCGGGAGAAGTACGGCATCAACGGGGAGAGCGTGCTGAGCGTGGAGCAGGTGCTGGCCACGCTGCCATCCAGCGACCAGGTCCTGGGCCAGGCCAAGCGGCCCAAGCTGgcctcgccgcaccccacgtcgccgcaccccacctcgccgcTCCCCCCGACCGGCATGGTGCCGCACCCGCTGCACATCGCGCCccacggcgcgctgcagcccccgcaCCAGCCCAGCCCCATCCCCACCTCCGTCATCCACCAGCCcgtggcgcgctcgccgccgcccccgtgcgggccgccggcgccgctgcccggcctgctcaGCCTGACACCCCTGGCGCCCGTCGTCCCGGCCAACATGGACGACCAGGACTTCCcgccctacccctaccccctgccgccgctgtaccccgccggccccaccggcgccgcgggcccgtgcgcaggcgccgccgccgcgctcaaccTGTCACGCGGCGCGAGGGAAGACCGCGCCCTTGACCGTGGCCTGGAGCGCGGCCTAGACCGTAGCCTGGAGCGTAGCCACGACCGCGGCCTGGAGCGCAGCCACGAGCGTAGCCACGAACGTAGCCACGAACGTAGCCACGACCGTAACCACGACCACGAGCGCATCCGGGAGAGAAGCCTGGAGCGAAGCCTGGAGCGGGCACCCTCCCCGTACGAGCACGAGAtgtcgagcggcagcggcgacgaggcggccctacaccagcccgccgccaacAACTGCCTGCCGCACAAGCTCCGCCACAAGTCTCACCTCGGCgagaaggaggcggcggtggcgctgctatcgctgcagccgctgcccgcCATCAAGACggagggccacggccaccacgtgACGCACCACGAGGccgacagcgcgcgcgccagcccacCCTGGGACGCCGAGGGCTCGAGCGACGAGAGGGACTCGGGCATCTCGCTCGGCGACTGCGGCTACAGCGGTGGCGAGGCCAGGCACGTgctcggccacggcctgggGCCCCTGGGCCACGagggccaggacgacgccgacggccaCCTCAAGAGCGAGCTCGCGAGGCTGGCCTCCGAAGTGGCCTCCCTCAAGAGCATGCTGCACAAGGGCACGCTGCCATCCCTACCGCCCCttccgccgctgcagcagccgaacGTCGCCCTCTACTAG
- Protein Sequence
- MVAELVSRQGGSPVNGETPGSSPQRQNSNPSSHPGHHPVNGNPSGHLSGHQSGPTITVNSVLARPPTGLFCAGPLPGAPNGPPNGHLAGHPNGHPNGHPNGHPNGLQNGHQNGHQNGHQNGHQNGHQNGHQNGHQNGHQNGLSNAMDQGRMSPSPHDHHQMQDMSPGSRSQSPDNGAYPQRKQREFIPDSKKDDSYWDRRRRNNEAAKRSREKRRFNDMILERRVVELSKENHVLKAQLTAIREKYGINGESVLSVEQVLATLPSSDQVLGQAKRPKLASPHPTSPHPTSPLPPTGMVPHPLHIAPHGALQPPHQPSPIPTSVIHQPVARSPPPPCGPPAPLPGLLSLTPLAPVVPANMDDQDFPPYPYPLPPLYPAGPTGAAGPCAGAAAALNLSRGAREDRALDRGLERGLDRSLERSHDRGLERSHERSHERSHERSHDRNHDHERIRERSLERSLERAPSPYEHEMSSGSGDEAALHQPAANNCLPHKLRHKSHLGEKEAAVALLSLQPLPAIKTEGHGHHVTHHEADSARASPPWDAEGSSDERDSGISLGDCGYSGGEARHVLGHGLGPLGHEGQDDADGHLKSELARLASEVASLKSMLHKGTLPSLPPLPPLQQPNVALY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00731212;
- 90% Identity
- -
- 80% Identity
- -