Fint005067.1
Basic Information
- Insect
- Frankliniella intonsa
- Gene Symbol
- Nfil3
- Assembly
- GCA_033675135.1
- Location
- CM066254.1:13583466-13585268[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-13 9.2e-11 40.5 3.1 2 54 169 221 168 228 0.94 2 2 0.009 7.6 5.6 0.0 43 63 559 579 553 580 0.73
Sequence Information
- Coding Sequence
- ATGGTCGCCGAGCTGGTGTCTCGACAGGGGGGCTCGCCCGTCAACGGCGAGACCCCCGGCAGCTCGCCGCAGCGGCAGAACAGCAACCcgggcggccaccccggccaccaccCTGGGAACGGCAACCCCGGCGCCCACCCGGGCCACCACCCCGGCGGGCCCACCATCACCGTCAACAGcgtgctcgcgcgcccgccctccggGCTCTtctgcgcggggccgctggccgggccgccctccggcccgcccaacGGACACCCCAACGGTCACCCCAACGGACACCAGAACGGCCATTCAAACGGACACCCCAACGGACACCCCAACGGACTGCCTAACGGACACCAGAACGGCATGCCGCCGGGCAGGATGTCGCCCAGCCCGCACGGTCAGCACGGCAACCACCCCCAGATGCAGGAGATGTCGCCCTCGTCGCGCAGCCAGTCGCCGGACAACGGCGCGTACCCGCAGCGCAAGCAGCGAGAGTTCATCCCCGACTCGAAGAAGGACGACAGCTACTGGgacaggcggcggcggaacaACGAAGCCGCCAAGCGGTCGCGGGAGAAGCGGAGGTTCAACGACATGATCCTGGAGCGGCGCGTCGTCGAGCTGTCCAAGGAGAACCACGTGCTCAAGGCGCAGCTGGCCGCCATCCGGGAGAAGTACGGCATCAACGGCGAGAGCGTGCTGAGCGTGGAGCAGGTGCTGGCCACGCTGCCGTCCAGCGACCAGGTCCTCGGCCAGGCCAAGCGGCCCAAGCTGGCCTCACcgcacccctccgcgccgcaccccacctcgccgcacccgacggcgacgccccaccagggcgcggtgccgcaCCCCCTGCACCTGGCGCCCCAcggcgcgctccagccgccgcaccagcccagccccatccCCACCTCCGTGATCCACCAGCCGgtggcgcgctcgccgccgccgcccgcgccgctgcccggcctgctcaGCCTCACGCCCCTGGCGCCCGTCGTCCCCAACGGCGACGACCAGGACTAcccgccctacccctaccccctgcccgccctgtacccggccggcccacccggggccgcgccgccgggcgcaggcgccgccgcggctctcaacctctcgcgcggcgccagggagGACCGCGGCCTGGACCGCAGCCTGGAACGAGGCCTGGAGCGTGGCCTGGAGAGGACCAGCCTGGAGCGCAGCCTAGAGCGCGGCCTGGAGAGGACCAGCCTGGAGCGCGGCATGGAGCGCGGCCTGGAGAGGAGCAGCCTGGAGCGCGGACTGGAGCGCAGCCTGGagcgcgcgccctcgccctaCGAGCACGAAATgtcgagcggcagcggcgacgaGGCCACCCTCCACCAGCCGGCCGCCAACAACTGCCTGCCGCACAAGCTCCGCCACAAGTCCCACCTCGGCGAgaaggaggcggcggtggcgctgctgtcgctgcagccgctgcccgCCATCAAGACGGagggccacggccaccacgtGGCGCACCACGAggcggacagcgcgcgcgccagcccgccctggGACGCGGAGGGCTCGAGCGACGAGAGGGACTCGGGCATCTCGCTCGGCGACTGcggctacggcggcggcgacgcccggcacggcctggtccacggcctcggcccgctcggccaCGAGGGtcaggacgacgccgacggccACCTCAAGAGCGAGCTGGCGAGGCTCGCCTCGGAGGTCGCCTCCCTCAAGAGCATGCTGCACAAGGGCACGCTgccgtcgctgccgccgctgccgcccctccaGCAGCCCAACGTCGCCCTGTACTGA
- Protein Sequence
- MVAELVSRQGGSPVNGETPGSSPQRQNSNPGGHPGHHPGNGNPGAHPGHHPGGPTITVNSVLARPPSGLFCAGPLAGPPSGPPNGHPNGHPNGHQNGHSNGHPNGHPNGLPNGHQNGMPPGRMSPSPHGQHGNHPQMQEMSPSSRSQSPDNGAYPQRKQREFIPDSKKDDSYWDRRRRNNEAAKRSREKRRFNDMILERRVVELSKENHVLKAQLAAIREKYGINGESVLSVEQVLATLPSSDQVLGQAKRPKLASPHPSAPHPTSPHPTATPHQGAVPHPLHLAPHGALQPPHQPSPIPTSVIHQPVARSPPPPAPLPGLLSLTPLAPVVPNGDDQDYPPYPYPLPALYPAGPPGAAPPGAGAAAALNLSRGAREDRGLDRSLERGLERGLERTSLERSLERGLERTSLERGMERGLERSSLERGLERSLERAPSPYEHEMSSGSGDEATLHQPAANNCLPHKLRHKSHLGEKEAAVALLSLQPLPAIKTEGHGHHVAHHEADSARASPPWDAEGSSDERDSGISLGDCGYGGGDARHGLVHGLGPLGHEGQDDADGHLKSELARLASEVASLKSMLHKGTLPSLPPLPPLQQPNVALY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00731212;
- 90% Identity
- iTF_00731212;
- 80% Identity
- -