Basic Information

Insect: Formica aserva
Gene Symbol: RREB1
Assembly: GCA_037039905.1
Location: JAXRKO010000002.1:2679249-2690164[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00037 0.074 15.0 1.7 1 23 96 118 96 118 0.97

2 15 0.00019 0.038 15.9 0.1 1 23 132 154 132 154 0.98

3 15 0.00013 0.025 16.5 4.7 1 21 160 180 160 183 0.95

4 15 0.0029 0.58 12.2 0.0 3 23 282 303 280 303 0.96

5 15 0.0037 0.74 11.8 3.3 2 23 309 331 309 331 0.96

6 15 0.94 1.9e+02 4.3 0.1 1 23 556 578 556 578 0.96

7 15 0.0001 0.021 16.7 0.2 1 23 587 609 587 609 0.98

8 15 0.0047 0.94 11.5 3.1 1 23 615 638 615 638 0.96

9 15 0.0042 0.83 11.7 2.2 3 23 1010 1031 1008 1031 0.96

10 15 0.00012 0.023 16.6 0.1 2 23 1300 1321 1299 1321 0.97

11 15 1.1 2.2e+02 4.0 10.4 1 23 1327 1350 1327 1350 0.96

12 15 0.0046 0.92 11.5 2.2 1 23 1393 1417 1393 1417 0.97

13 15 0.14 28 6.9 1.8 1 23 1498 1520 1498 1521 0.96

14 15 0.017 3.4 9.7 0.4 3 23 1573 1593 1571 1593 0.93

15 15 0.003 0.59 12.2 5.2 1 23 1599 1621 1599 1621 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00037	0.074	15.0	1.7	1	23	96	118	96	118	0.97
2	15	0.00019	0.038	15.9	0.1	1	23	132	154	132	154	0.98
3	15	0.00013	0.025	16.5	4.7	1	21	160	180	160	183	0.95
4	15	0.0029	0.58	12.2	0.0	3	23	282	303	280	303	0.96
5	15	0.0037	0.74	11.8	3.3	2	23	309	331	309	331	0.96
6	15	0.94	1.9e+02	4.3	0.1	1	23	556	578	556	578	0.96
7	15	0.0001	0.021	16.7	0.2	1	23	587	609	587	609	0.98
8	15	0.0047	0.94	11.5	3.1	1	23	615	638	615	638	0.96
9	15	0.0042	0.83	11.7	2.2	3	23	1010	1031	1008	1031	0.96
10	15	0.00012	0.023	16.6	0.1	2	23	1300	1321	1299	1321	0.97
11	15	1.1	2.2e+02	4.0	10.4	1	23	1327	1350	1327	1350	0.96
12	15	0.0046	0.92	11.5	2.2	1	23	1393	1417	1393	1417	0.97
13	15	0.14	28	6.9	1.8	1	23	1498	1520	1498	1521	0.96
14	15	0.017	3.4	9.7	0.4	3	23	1573	1593	1571	1593	0.93
15	15	0.003	0.59	12.2	5.2	1	23	1599	1621	1599	1621	0.98

Sequence Information

Coding Sequence: ATGGCTGAGGAATACGAAGAATACGAGAAACACATTGTGAAGGACGCGCATGACTTGTTAGCCAAATTAGTCTCAGATTTTAGTCCTGAACAATTTGATGATCTATTTGATCATCTGCTTTATTGCATGGTATTCTGCAGCTACGCAATTGACAAAATACTGCTaggaagaaataatataaaacCGATTGAATCTGAGAATGGAACCGATCAAGAGCAGGAGAACGAAACACAAATTGATGCCGCATCACCATCATCAAGCGTCGAGTTGTCGGAGAATGGCACGCATCCGTGCCCAATGTGCTCGTCGATATTTTCCAGTTCTCACGAACTGACGAATCATCTGCGCGGCCATAACTCACCCCGCAGCACAGACTGCAGCGGCGAAGAGGACTACAGCTGCGGGGTTTGCAACAAGGTGCTCAGCTCGGCAAGCTCGCTGGACCGACACGTCCTGGTACACTCGGGCGAACGGCCGTTCAAGTGCAAATACTGCAACATGTCGTTCACGACGAACGGCAATATGAACCGTCACGTGAGGTGCACCCATCGGGTGGCATCGCCGAATAGTTGCACGGACTCCGAGGGCAGCAGCGGCTCGGAGAGACCGGCGACGACGAATCAGGGCGAGTACAACAACAACGAATTAGCCAGGCGCAACTCGCCGACTTTGATCGACGACCAGCAACAACCGTCGTCGCCTGGCAATCATCACGCGAGCAAGCGAAAATGCTTGCAAGATGACGCCAGTGACACGGAGGAACAGAAGAGGCACAAGACCCTCATGAATAATGCCAGAATAATGATAAGATGCCAACCGGACGGGGAGCAGATGACGTTCGGTTGTATGATCTGTGGCAAAGACTTCGTGAGCGGCGCGATGCTAGAGGCTCACATGGAACGCGTGCATCCGGAATCTCTGGCCACCTGCGAGATCTGCAGCATGACCTTCAAGAATCACCGGCAATTGAACCTTCATCGTTCTATGAGTCACTATAAGAAGAATGCAGGCGGCAACAACAGCCGTCGCAGCACCGTGGACGGTTTCGGCGATCTCACGTTCATGGACTTTTCGGCAGCGAAGTTCGCGGAGATCGCTCGACGGATGTGCGAGCAGGAGCTGCACCGGCCGGCCTCTGGCGAGGTCAACAGGTTCCAGTGCATGAAGTGCCTGCACGCGTTTCCGTGCAGACAGGCGCAGCTCGATCATGAAAAGGAATGCAAAGGTCCATACAAGAACAAGAGAAACAGTAACGACAGcaacaataataatgataacaatACCAATAACAATCTCGAAACGGAACTGGACGCTCCGTCCCCGCAGCCCGACGATCCCAAAACGACGCGCGAGATCTTCTTCGCCGTGTTGGATCTGCAGAATAAATCCTTGGCGCGCGAAGCGAAGGAACCTAGGGAGCCGAAAGAGATCAAGGAGCCGAAGGAGATGAAGGATCTAGCGGATATCCCGAGCATCTTGTCCGTCAGTTTGAACGGGCTGCCGACCTTCCCGCGATCGGACACCAGCACGCCCGAGAACAACATCAAGTTTAATCCGAATATCGGTTCTTCGGGTTCGTCGGGCACCTGCTCGTCCGAATATAACGAGGAGGAGGCGCAGGATGCTTTCACCGCGGAATTTCGGAAAATGAAGCTGAAGGGCGAGTTTCCCTGCAGATTGTGCGCGTCCGTGTTCCCCAATCTGCGGGCGCTCAAGGGGCACAATCGCGCGCATATGAACGTAGAGCCGGGAATGCCATATCCGTGCAATATGTGCCCCTTCACCAGTACCGACAAAGGGGCCCTGTTGAAGCACTTGAGATCGCATAACGGTGACCGACCTTTCGAATGCTCCCTCTGCAATTACGCGTTTACCACTAAGGCAAATTGCGAGAGGCATGTAAAGAATCGCCATGGAATGATCAGCAAGGAGGATGTTAAGAATGCGCTGATCTATCATCCAAGCGAGGACTCGACAAATGAGAATGTTGAGAGAAGCTCGCCCAGAGGTGTCAGGGATGACGTGCGAAAAACGCTCATCTATCCGAACGAACGTGAAGAAACCTCTCAACAACAGCAGATACATTATCCGCCTGTATCGATGGACTGTAACCCGGGACCTTCGAATGTTTGCGCTGAAATGCTGATGAACTGTTACGAGAAGCCGGACATATTCCATAGACCAATAAAAATACAGGCTCTGAATCTCGTGAAAAAAAATGCCGAAGAATCGAACGCGTCTCATGATCTGATCGTGAAGTCTAATTATTCAAAGATCGACGAGGATATTGAGTCAAGATCATCGGATGGCAGCGTGTCTCTAGTCAGCGATACCAAAACAGATACACACCAAAGAATTCAAGCTAGTCCGATAAATCTGACCAAGTCCACGACAAGCTCCGTGTTAAGTTCGGGAGAAGACGGTCCTTTGGATCTATCCATGGATGTTGTTCTAGATCTTAGCAGGAAACGGAAGAGGGAGAACGAAAATTCTCAGGAGGAGAAACATTATAAGAACAATCAACAGGAATTGTATGCCGCGAATCCGGCACTGCTGCTAACTCAAGCTCTGCTGAACAGAGCACGCGAAAGTTCGACTACGTCGTTGGAGAATTTTTGTGCGAGCACTTTCTATCGTAATCTCAACACGTTGACTAGCGCCTCCATGATACCGTCGTATTTTCTCAATCCTCACATGTTTGGTCAGGAATTGACCGAGAAGGGCAAATTGCAGAAGGAGCTAGTCAGGGGTTTGCAATTGACCGGCGGCAGCACCTTTCCCGTGGATCCATCATTGCCCAGCACCAGTTACGCGGCATATGCGCAGGCGCGGGACATCCCGCAAACCTCGAGCGAACACAACGCCTACGCGAACCTGGTGAACGCGCAGATAGCCAACCAAGCCGCACCGAGCCGCGAGAAAACGGATAGCATTTCATCGAACGATCCCGTGAAGATGGTACTCAAAAACGGCGTGCTAATACCCAAGCAGAAGCAGCGCAGATACCGCACCGAGAGACCGTTCGGTTGCGAGCACTGCACGGCAAGATTCACACTGCGAAGCAACATGGAACGACATATTAAGCAACAACATCCTCAGTATTGGAGCCAAAGACCCCGCGGCGGACATTCAACTAGAGGCAGACCGCCTGCGAATCATCCGAATATGATGCAGAATTCCGGCCCGTCAACCTCGCAAGTAATTCAACCATATCCGAATATTCTTCAAAACGTCGACTCGTCAATGGTTACATCGGACTATAATACGCATCCCATTTCAGATCAAGTAAAGTATGCCATTCTAGCACAACAATTAAAAGCCGATAAAATGGATGATAATGATTCGGATGACGAAATGGTAATAGATGAGGAATCAGGCGACAGGGATGCACAGGAACCGCAAGCTCAGCACGAACTTAGCACAAGCTTGCTGAGAGATCAGTTAGAGAGCAGCGAGGGCATTAAAGATATCGTCGTGAAAAAGGAACTGATTGACCCCGCGGAAGAGACCTCGGAAGAATCTCACGGTGAACAAGTTGCACGAAACGGCGTAGACAGGATCAACGCGGAAGAATCTGCGGCTGCTGAAAACAAATCGATACACAACGAAGAAATGATCAAGACGGAACCCTCCGGGAAAGAGCAGGGCAAACTCGAGGACGGAGCAGCCGATCTCGCGAGTGTCTCGAAACTATTGGACAACGCATCTCAGCAATATCAGGAATTCAAACCGCAATACTTGAGCGACGAAGAAGGTCCTGTAGCCTCGACCAGTGGCAACAATTCCGGTAGCGAAAAGTCCGACTCGAATTCTTTAAACTCCGGAAATGATTCTTCatcgaataaaaagaaaaagaagaagaagaagtccGCGTACTCGATGGCACCAAATCGGGTCCCCTGTCCTTATTGTCCGCGTCAGTTCCCTTGGAGCTCATCGCTGAGACGGCACATCCTCACTCATACCGGCCAGAAGCCCTTTCAGTGCACACATTGCTCGCATTACTTTACCACGAAGTCCAACTGCGACCGCCACTTGTTAAGGAAACATAAGGCAAAGGCGAATAAGATGCGCCGTGTCAGAAATTCCTCCTCGCCAGACGTACAGGTGGTTgccagcagcagcagcagtagCAGTAACAATACGTTCTCCATGAGAAACGTGCCCGAGAGACCATACAAGTGCAATCAGTGCCCAAGCTCGACCTTCTCTACTTTAGGCAATCTGAAAAAGCACCGATCGACCAAGCATCGTAAGACTACGTCCCGGTCGGAGTCCAGCGATCAACAGAATAGTCCACCGCAGTGCTCCAACACGCAGAACGATCATAGTGATTACGAGAGCCGGTCATCGAGCGCATCCGAGAACATGGAGAATTCCGCTAGCACAGCCGTAAAGGTCAATTCTAATACGACATCTCTGACATCGATGAACGAGATCACCAGAGCACGCAAGTCGCCGAGATCATCGCCTGGTCCCAGCGATGCTCCCTTCAAATGTTACTTATGTGACAGCGGCTTTTCCGAGCGTCAAGATAATTTGGATCACATCAAAATGCACCACAAGCGCTCGTACGATATGCTGAAGGCCAAGGGCGCCCTCGATATGGCATCTATGAACATAGACGCGAATGAAGATCAGATGGCACAGCAACATCCTAGTGACGGCGAAGAGAAGAGAGGTCGATTTCCCGATTACAGTAATAGAAAgGTTATATGTGCTTTCTGTATGAGACGATTTTGGTCCGCGGAAGATCTCCGGCGTCACATGAGGACCCACACAGGCGAAAGACCATTTGAATGCGACATCTGCACTAGGAAATTCACGCTGAAGCACAGCATGCTGCGCCATCGTAAAAAGCACGAGTCCGTGGATTCTGCCATGTACATAGGTAATAGCGGTGACGAGGACAACTCGCCCGCGCAGCCACCGACGATAACACCTAGAAGTCAGCAGCATTCGCCAATCTCTACGAATACCAGCAGGCCCCGTACCCAGGACAGAATCTCTCTACCGACCGTTGCGGCAGTCGCAACAGCGGACGCGGCACCCTGTGCGCTTATGCGGTACAATCACTACGACAACATGGCCACTCTCACCGGCAGAATGGCAAACGACAGCTCGCAGAACGCTGCGCCTGCTTCTCTGCCTTCCCCGCCACCTCCCGCGGAAGTGCCCAGCGAGAGCGGCGACAACGACTTGATCTCCAATTTGCTGGGCATACGTGAGAAAGGTTTACTCGATAAGGTTCTTCTGAGCTCGGCGGACGACGCGGCCAAGTTGTTGGGTGTCAATCATAGCGAGTGA
Protein Sequence: MAEEYEEYEKHIVKDAHDLLAKLVSDFSPEQFDDLFDHLLYCMVFCSYAIDKILLGRNNIKPIESENGTDQEQENETQIDAASPSSSVELSENGTHPCPMCSSIFSSSHELTNHLRGHNSPRSTDCSGEEDYSCGVCNKVLSSASSLDRHVLVHSGERPFKCKYCNMSFTTNGNMNRHVRCTHRVASPNSCTDSEGSSGSERPATTNQGEYNNNELARRNSPTLIDDQQQPSSPGNHHASKRKCLQDDASDTEEQKRHKTLMNNARIMIRCQPDGEQMTFGCMICGKDFVSGAMLEAHMERVHPESLATCEICSMTFKNHRQLNLHRSMSHYKKNAGGNNSRRSTVDGFGDLTFMDFSAAKFAEIARRMCEQELHRPASGEVNRFQCMKCLHAFPCRQAQLDHEKECKGPYKNKRNSNDSNNNNDNNTNNNLETELDAPSPQPDDPKTTREIFFAVLDLQNKSLAREAKEPREPKEIKEPKEMKDLADIPSILSVSLNGLPTFPRSDTSTPENNIKFNPNIGSSGSSGTCSSEYNEEEAQDAFTAEFRKMKLKGEFPCRLCASVFPNLRALKGHNRAHMNVEPGMPYPCNMCPFTSTDKGALLKHLRSHNGDRPFECSLCNYAFTTKANCERHVKNRHGMISKEDVKNALIYHPSEDSTNENVERSSPRGVRDDVRKTLIYPNEREETSQQQQIHYPPVSMDCNPGPSNVCAEMLMNCYEKPDIFHRPIKIQALNLVKKNAEESNASHDLIVKSNYSKIDEDIESRSSDGSVSLVSDTKTDTHQRIQASPINLTKSTTSSVLSSGEDGPLDLSMDVVLDLSRKRKRENENSQEEKHYKNNQQELYAANPALLLTQALLNRARESSTTSLENFCASTFYRNLNTLTSASMIPSYFLNPHMFGQELTEKGKLQKELVRGLQLTGGSTFPVDPSLPSTSYAAYAQARDIPQTSSEHNAYANLVNAQIANQAAPSREKTDSISSNDPVKMVLKNGVLIPKQKQRRYRTERPFGCEHCTARFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPANHPNMMQNSGPSTSQVIQPYPNILQNVDSSMVTSDYNTHPISDQVKYAILAQQLKADKMDDNDSDDEMVIDEESGDRDAQEPQAQHELSTSLLRDQLESSEGIKDIVVKKELIDPAEETSEESHGEQVARNGVDRINAEESAAAENKSIHNEEMIKTEPSGKEQGKLEDGAADLASVSKLLDNASQQYQEFKPQYLSDEEGPVASTSGNNSGSEKSDSNSLNSGNDSSSNKKKKKKKKSAYSMAPNRVPCPYCPRQFPWSSSLRRHILTHTGQKPFQCTHCSHYFTTKSNCDRHLLRKHKAKANKMRRVRNSSSPDVQVVASSSSSSSNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHRKTTSRSESSDQQNSPPQCSNTQNDHSDYESRSSSASENMENSASTAVKVNSNTTSLTSMNEITRARKSPRSSPGPSDAPFKCYLCDSGFSERQDNLDHIKMHHKRSYDMLKAKGALDMASMNIDANEDQMAQQHPSDGEEKRGRFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFECDICTRKFTLKHSMLRHRKKHESVDSAMYIGNSGDEDNSPAQPPTITPRSQQHSPISTNTSRPRTQDRISLPTVAAVATADAAPCALMRYNHYDNMATLTGRMANDSSQNAAPASLPSPPPPAEVPSESGDNDLISNLLGIREKGLLDKVLLSSADDAAKLLGVNHSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01016049;
90% Identity: iTF_00868296;
80% Identity: -