Basic Information

Insect: Formica aserva
Gene Symbol: -
Assembly: GCA_037039905.1
Location: JAXRKO010000013.1:6152868-6157677[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.48 97 5.2 7.9 2 23 283 305 282 305 0.97

2 19 0.043 8.6 8.5 2.2 1 23 358 380 358 380 0.97

3 19 0.031 6.2 8.9 1.5 1 23 429 451 429 451 0.98

4 19 0.065 13 7.9 0.3 1 20 503 522 503 523 0.93

5 19 0.23 47 6.2 2.1 1 23 564 586 564 586 0.94

6 19 0.00013 0.026 16.4 0.7 1 23 629 651 629 651 0.97

7 19 0.00049 0.098 14.6 0.1 1 23 657 679 657 679 0.97

8 19 0.00041 0.082 14.9 2.4 1 23 724 747 724 747 0.96

9 19 0.00055 0.11 14.5 2.0 1 23 753 776 753 776 0.96

10 19 6e-06 0.0012 20.6 1.0 2 23 783 805 782 805 0.97

11 19 0.00029 0.058 15.3 0.0 1 23 813 835 813 835 0.92

12 19 0.068 14 7.9 0.3 1 20 897 916 897 916 0.97

13 19 0.00034 0.068 15.1 0.1 2 23 936 957 935 957 0.97

14 19 0.067 13 7.9 4.0 1 23 970 992 970 992 0.97

15 19 0.0047 0.93 11.5 2.3 1 23 1014 1037 1014 1037 0.92

16 19 0.0029 0.57 12.2 1.8 2 23 1097 1119 1096 1119 0.96

17 19 0.0007 0.14 14.1 1.0 1 23 1141 1164 1141 1164 0.93

18 19 6.2 1.2e+03 1.7 3.7 1 23 1198 1222 1198 1222 0.91

19 19 0.0085 1.7 10.7 0.4 2 23 1251 1273 1251 1273 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.48	97	5.2	7.9	2	23	283	305	282	305	0.97
2	19	0.043	8.6	8.5	2.2	1	23	358	380	358	380	0.97
3	19	0.031	6.2	8.9	1.5	1	23	429	451	429	451	0.98
4	19	0.065	13	7.9	0.3	1	20	503	522	503	523	0.93
5	19	0.23	47	6.2	2.1	1	23	564	586	564	586	0.94
6	19	0.00013	0.026	16.4	0.7	1	23	629	651	629	651	0.97
7	19	0.00049	0.098	14.6	0.1	1	23	657	679	657	679	0.97
8	19	0.00041	0.082	14.9	2.4	1	23	724	747	724	747	0.96
9	19	0.00055	0.11	14.5	2.0	1	23	753	776	753	776	0.96
10	19	6e-06	0.0012	20.6	1.0	2	23	783	805	782	805	0.97
11	19	0.00029	0.058	15.3	0.0	1	23	813	835	813	835	0.92
12	19	0.068	14	7.9	0.3	1	20	897	916	897	916	0.97
13	19	0.00034	0.068	15.1	0.1	2	23	936	957	935	957	0.97
14	19	0.067	13	7.9	4.0	1	23	970	992	970	992	0.97
15	19	0.0047	0.93	11.5	2.3	1	23	1014	1037	1014	1037	0.92
16	19	0.0029	0.57	12.2	1.8	2	23	1097	1119	1096	1119	0.96
17	19	0.0007	0.14	14.1	1.0	1	23	1141	1164	1141	1164	0.93
18	19	6.2	1.2e+03	1.7	3.7	1	23	1198	1222	1198	1222	0.91
19	19	0.0085	1.7	10.7	0.4	2	23	1251	1273	1251	1273	0.96

Sequence Information

Coding Sequence: ATGGAGGACGAAGACGTGGTGGAGATCGGGAACGTGGAGAATGTCTGCCGGCTGTGCCTGTCCGCGGACGAGCCGAGGTTCTCGGTGTTCGCGCAGGACCGAGAGGAAGATCCGTCCGGCGTGCCGTTGACCGCCAAGATCCAGGCTTGCCTGTCGATCCAGATTTCAGCCACTGATAGGTTGTCCACGCTAATATGCGCAAATTGTGTGAAGAATGTTAACCAGTGGCATACCTACAAGGAGTCATGTCAGCGTTCACAGGATAAGTTGCAAGAATGGCTGGCAACTCAGTCGCAACCAAATCCTACGGTTGTAACAATCAAGGATGAACCAATGGATATTGACTACGAGGACAATATAGAGATTATCTCAGAGACTACCAATAACTTGGAACATGTACATCCACCGGCTGAAACATTGGAAAATAAGGAGACTGATAATAAGGAAGTGCACGAAGTAGATGAAACTGATGCAAAAATTGATACGAAAACTGATGCGAAAACTGATGCGAATGACACACATAAAGAGGATAACTCGGAAACAGTTCCATCTGCCACTGAGATGCAGCCTGACAAAGATCAAGATCAAATAGATCAGCAGGATTCTACAGCTTTACGTTCCATTAAAATCGAGCCACAGGATGACGATGATACCGATTGCACTATCGAAGTAGAATCCGCAAACGGCAGTGAACTATTATTGAATCCCATGGCAGTTCCCACGAAGGAAGATACGGTTATGGAAGCCGATTCTACGCAAAAATCTAACGCAGCTAGCGCGCCGCCCAAAAAGAAACTGAGACGCGGTCCTCATACCCATTTCAGAGGAACGCGTGTCTTTAAAAAGAAGTGCACGCATTGTCAGATTTTTCTGCATTCCAAATATTCGTATATGAAGCACATGAAGAGATTCCACAGTAAGGAGAACAACGGTATCGACAACTTGGAGTCGATATCGCagaacgacgacgacgaagagATGGTGGAGGATTTGGAAGACGAGTTGGTCAGTATGGAGAAGGATTCACCGCTGACGCAGGTCCAACAGGAGATTATCAGCCAATTGAAAACATTCTCCTGCTATTCCTGCGAACAGACGTTTAACGATCGGCGTAGCACGCTCTCCCACATACGCCAACATCTGCCGGATTTAAGACCGTACACGTGCATTGCTTGCTTGACTGAATTCCCCGATCGATCCATGTACCAATTACATTGCGGCGCATCCTTTGAGTGCGCCATGAAGATTGCCCTTGTAGTGCCCAAACACGGTAACGAGCGGTACTTTACATGTAACATGTGCTTACGTTCGATGCGCGACAGGAAGGAACTACTGAGCCACTTGTCGAAACATTCTGACAAGCAATACGAGGAGATGATGTCGCCGGCACGCGCGCCACCCAAATTGAAACCGATGGCGCCGTTGCCATCTGCAAAAAGCAGCTCCGATAAAGCGCAGAAGGCTGTCATCAAAGGACCTTATAAGAATGGCGATCCGGCGCACAATCATGCTTGCGATCTATGTGGCATGATTTACAGATACCGACCCAATATGTTTAAGCATCGCGAATTCTGCATGCGGCTGCAGCCAGAGAATAGAACATCGTACAAGTGCGTGCACTGTTCCATGACGTTCCTCGTGTTTAAGAAGTTCCATACTCACATCACGGTTGATCACAAAAAGAAAGAGTTTACTTGCATTGTGTGCAACTCGAAATTCCGATCGCCCAGCGATTACTTGACTCATCACGAGAATCATCGCGCGGCGACACGCGGCAATCGTCAGACGCAGGAGGACATGTCGCAGAATGGAGTTCAGATACCATTGAAGGAACGGAACCGAGGGGACGCCAAACTGGTCAAGTCAAGAATCGGCGGTCAGAAATACAGTTGTGCGCTCTGCACCCAGGAATTCTCCACGAGGTCTGAGCTAACGGAGCACCGAAATCTCCATCTCAAAGTGAAGATATACTCGTGCGTTATTTGTCGCAGCATGTTTAGTAGTCCGGGTGCGTTAGAGATCCACATGAAAGATCACGGCATCGAAGACCCGAATGAACGAAACGCCAATATCTCTTGCGTGGAATACGGTACTTTAGATGAGGACATAAGGATTGACGAGAAAGACTCGATGAACGCGAGTGCCATCTCGGATCCCGGTACGCAGATTCACGAGTGCTGCGAGTGCGGTAAGGTGATGTCAAATTACGCCAATCTTCGCCGACATACCAAGATTGCACATCGGAACGCCAAGATCTATGATTGTGCCGAATGCTCGCGAATGTTTACGCGTAAGGAGCTGTATGATCACCATATGCAGATCAAACACAACTCGAAGACGATGTTGCAGTGCCCTCAATGTCCCAAGAGTTTTGTCTTCCAGTCGAACTTTACTTATCATTTTCGCACCGCTCATCTTGAGAAATCGCAAAACGGTTACGCATGCGACATCTGCGGCAAAGTTTTCGTCGAGGAAGCGTCCTTGAAAATACACAAGGGCTGGCATAATCGCGCCAACTCTCGTCTGAGCACACGATTCATACTGGGTAATCAGAAGACGCCCGATGACGAGCCGCAAATGGAGTCGGCCGGTATCGAATCGGGCGAGAATTCGGAACGGCCAGCAAGAGCACGAAAGTCATTCCCCAATCCTCCGCTTCAATCACCGACGACTTCATCGGAGGGAAATTTCCAGTGTCAAGTATGCAATGATAAGTTCAACGACGTCACGGAGTTAAGAAATCATTTATGGGACGTCCATTGCGCCCGCAACAAGCCGGAGAAGAGTTTCTCCAACGACGAACTCCAGTGCGAGCTGTGCACAAACGTCTTCCCCGATCGGGAGACCTTGGCGTCACACATGCGGTGGCATAAGGCCAACCCGATTCTCAGCGACATACGAAAGACGTACTCTTGCGATGTGTGTTGCAAGTCTTACAGCTCAAAGAAGGTCTTGTGGAAGCATAAGAAGCTACACAAGGCCACCGTTGTGGCGTCGATCAAATTCCAATCCTTGGCGAGGAAACCGATGGCCAGTCAATTTCTTTGCAACTTTTGCCGGAAAGTGTTCTCCAGTGGCCAGTCGCTACAACGGCATAAGCTTAACTTTCATAGTGAGCTGCAGAACCCGCAACGGACGCAGCAACAATTGTACAATAGCAATCGTAGATCGTCGTATGAGGACGAGCCGAGAGTGAAGCGTATGAAGCTCGAGATCGATGACGACAATCCGCCGCCTAAGCTGCCGCCATTTGCTATGGATTTCGCCGGCGAGAGGAGGAAGCCAGTCATGTGTCATTTGTGCAAGAAGATGTTCCCGAATATGAGCGTACTATACAAACACAAGCAGACCGTGCACAAGCATCGAGGAAGGAAAGACCTGATACCTGAGTGCATACCGATGCCGACTCAAGGCGGCAAGTTTTCATGCAACATCTGCTTCAAGGAGTTCCCAGGCCTGTCGAATCTGCGACAGCACTTCACGATTAAGCACAAGAAGGGCTCGGAATCCGGCCATCCGCGACCGAGCGGCGACGCGCTCTCCGAACGACCGACGAAGGAAGCCGAGTCACCGTCCCACAACAATGTCATGTTCAGCTGCAAACTGTGCAAGCAGTGCCACGTCTTCAACAGGGAAGCGCTCATGAATCACATCACCACTGTGCACAACGCGGTATACCAGGCTGACAGCAGAACGTTTCACAGGGAGGTCAATTTGGGCGCTTACGTAGTGAAGGGCGCGATCGGCGCTACGTGCCCACGATGCAACGTCAAGTATCCCAACAACCGTGCTCTAAAGATACACTATATTAAATTCCACGAGAACGCCGATTAA
Protein Sequence: MEDEDVVEIGNVENVCRLCLSADEPRFSVFAQDREEDPSGVPLTAKIQACLSIQISATDRLSTLICANCVKNVNQWHTYKESCQRSQDKLQEWLATQSQPNPTVVTIKDEPMDIDYEDNIEIISETTNNLEHVHPPAETLENKETDNKEVHEVDETDAKIDTKTDAKTDANDTHKEDNSETVPSATEMQPDKDQDQIDQQDSTALRSIKIEPQDDDDTDCTIEVESANGSELLLNPMAVPTKEDTVMEADSTQKSNAASAPPKKKLRRGPHTHFRGTRVFKKKCTHCQIFLHSKYSYMKHMKRFHSKENNGIDNLESISQNDDDEEMVEDLEDELVSMEKDSPLTQVQQEIISQLKTFSCYSCEQTFNDRRSTLSHIRQHLPDLRPYTCIACLTEFPDRSMYQLHCGASFECAMKIALVVPKHGNERYFTCNMCLRSMRDRKELLSHLSKHSDKQYEEMMSPARAPPKLKPMAPLPSAKSSSDKAQKAVIKGPYKNGDPAHNHACDLCGMIYRYRPNMFKHREFCMRLQPENRTSYKCVHCSMTFLVFKKFHTHITVDHKKKEFTCIVCNSKFRSPSDYLTHHENHRAATRGNRQTQEDMSQNGVQIPLKERNRGDAKLVKSRIGGQKYSCALCTQEFSTRSELTEHRNLHLKVKIYSCVICRSMFSSPGALEIHMKDHGIEDPNERNANISCVEYGTLDEDIRIDEKDSMNASAISDPGTQIHECCECGKVMSNYANLRRHTKIAHRNAKIYDCAECSRMFTRKELYDHHMQIKHNSKTMLQCPQCPKSFVFQSNFTYHFRTAHLEKSQNGYACDICGKVFVEEASLKIHKGWHNRANSRLSTRFILGNQKTPDDEPQMESAGIESGENSERPARARKSFPNPPLQSPTTSSEGNFQCQVCNDKFNDVTELRNHLWDVHCARNKPEKSFSNDELQCELCTNVFPDRETLASHMRWHKANPILSDIRKTYSCDVCCKSYSSKKVLWKHKKLHKATVVASIKFQSLARKPMASQFLCNFCRKVFSSGQSLQRHKLNFHSELQNPQRTQQQLYNSNRRSSYEDEPRVKRMKLEIDDDNPPPKLPPFAMDFAGERRKPVMCHLCKKMFPNMSVLYKHKQTVHKHRGRKDLIPECIPMPTQGGKFSCNICFKEFPGLSNLRQHFTIKHKKGSESGHPRPSGDALSERPTKEAESPSHNNVMFSCKLCKQCHVFNREALMNHITTVHNAVYQADSRTFHREVNLGAYVVKGAIGATCPRCNVKYPNNRALKIHYIKFHENAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00110015;
90% Identity: iTF_01245407;
80% Identity: -