Basic Information

Insect: Ferdinandea cuprea
Gene Symbol: -
Assembly: GCA_963576555.1
Location: OY754958.1:32598020-32611001[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.9e-05 0.006 17.8 2.1 1 23 476 498 476 498 0.96

2 18 1e-05 0.0015 19.7 0.4 1 23 504 526 504 526 0.97

3 18 2e-05 0.003 18.8 0.5 1 23 532 554 532 554 0.98

4 18 1.7e-05 0.0025 19.0 3.1 1 23 560 582 560 582 0.97

5 18 3.8e-05 0.0057 17.9 4.7 1 23 588 610 588 610 0.99

6 18 6.9e-05 0.01 17.0 5.7 1 23 616 638 616 638 0.97

7 18 1.9e-07 2.9e-05 25.1 4.3 1 23 644 666 644 666 0.98

8 18 1.2e-07 1.8e-05 25.7 2.4 1 23 672 694 672 694 0.97

9 18 0.00016 0.025 15.9 5.7 1 23 700 722 700 722 0.97

10 18 2e-05 0.0031 18.7 6.5 1 23 728 750 728 750 0.98

11 18 3.4e-06 0.00052 21.2 4.5 1 23 756 778 756 778 0.98

12 18 8e-06 0.0012 20.0 8.1 1 23 784 806 784 806 0.98

13 18 1.9e-06 0.00029 21.9 7.9 1 23 812 834 812 834 0.98

14 18 7.3e-07 0.00011 23.3 7.7 1 23 840 862 840 862 0.98

15 18 0.00023 0.034 15.4 9.5 1 23 868 891 868 891 0.95

16 18 0.00019 0.029 15.7 0.5 1 23 897 919 897 919 0.97

17 18 0.00086 0.13 13.6 4.4 1 23 929 951 929 951 0.98

18 18 7.1e-06 0.0011 20.2 1.7 1 23 957 980 957 980 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.9e-05	0.006	17.8	2.1	1	23	476	498	476	498	0.96
2	18	1e-05	0.0015	19.7	0.4	1	23	504	526	504	526	0.97
3	18	2e-05	0.003	18.8	0.5	1	23	532	554	532	554	0.98
4	18	1.7e-05	0.0025	19.0	3.1	1	23	560	582	560	582	0.97
5	18	3.8e-05	0.0057	17.9	4.7	1	23	588	610	588	610	0.99
6	18	6.9e-05	0.01	17.0	5.7	1	23	616	638	616	638	0.97
7	18	1.9e-07	2.9e-05	25.1	4.3	1	23	644	666	644	666	0.98
8	18	1.2e-07	1.8e-05	25.7	2.4	1	23	672	694	672	694	0.97
9	18	0.00016	0.025	15.9	5.7	1	23	700	722	700	722	0.97
10	18	2e-05	0.0031	18.7	6.5	1	23	728	750	728	750	0.98
11	18	3.4e-06	0.00052	21.2	4.5	1	23	756	778	756	778	0.98
12	18	8e-06	0.0012	20.0	8.1	1	23	784	806	784	806	0.98
13	18	1.9e-06	0.00029	21.9	7.9	1	23	812	834	812	834	0.98
14	18	7.3e-07	0.00011	23.3	7.7	1	23	840	862	840	862	0.98
15	18	0.00023	0.034	15.4	9.5	1	23	868	891	868	891	0.95
16	18	0.00019	0.029	15.7	0.5	1	23	897	919	897	919	0.97
17	18	0.00086	0.13	13.6	4.4	1	23	929	951	929	951	0.98
18	18	7.1e-06	0.0011	20.2	1.7	1	23	957	980	957	980	0.96

Sequence Information

Coding Sequence: ATGAATTCGGATCATACAGCAGCTCCTGGCGAATCGTCATCAAATCCGAATGACTCTCAACAAAGTCGGCATTCGCCACAGCAGCAGgcccagcagcagcaacaacaacaacaacaacaacaacagcagcagcagcaccatcaacatcagcagcagcaacaacaacaacagcagcagcaacaacaacaacaacaacaacagcagcagcaacaacaacaattggcTCACCAGCGACATCCGCAACAATTGAATGAACAACATGTCCAGCAACAACACCACGAAAATCCTGGTATTGGCGGAGTTATTCAGCCTGTTGGCGGGATCGATTCGGATGTATccaaacaacaacatcaacaccaTCATCCGTCGCTTGTTACGGGTACCCAACAtCTTGGAAAATACTGGGTGGTTACGAATCTATTTCAGGGTACAGGTCAGCCGCCATACAATATTGGTGTAAcaccaacaacatcagcagtTCCTACACTACCGCCTCCAATAACATCTCATTCAAGCGCCTCAGCAGCAAAATCAGGAAATTccaagcaacagcagcagcaagacCAGCAACACGCTCCAAACTCGCACACACAAACACCAGCACACATAGTCTCGTCAGTTGGTGCAACATCTCTACAAATACCCAATCCAATGATCACAAATGCTTCACTGAATCAGCAGCAGCTTCCGAATGGCACTATTATTGCAGGACCACGTCATCCGGATTCATTACACGTCCATgGAACGATGTCCTCCGACGATAATCGACACGTCTCACACGGTATGCAAGACATAAAGGAGGAGAAACCTTTCGCCAATGGCAAGCAAAACAATCACATGGTGGCTCATGTCAATCCAGCATCTTCCGTTTCGTCAAAAATGAATTCTGGCAGTGGTGGTGGCAATAATCCGCAATCGGCAGAGCCGAGTGGCGGACAGATGGTAAATAAACTACAAGCGGGCGGACCTGTTGGCGAACAGCAAGAGCTGGGCAATAGCAAGCCGCCACATGGCGTCGAAATGTACAAAGTCAATATTGAAGATTTGAGTCAATTTTTATCATATCACGAGGTCTTTGGCAAGATCCATGGCGAAGTAATAAATCAACAGCAAATATCATCGCACACGGTAACGCATCCTACTACAAATGTATCAACCTCAAATGCTGGTGGCAATACCTCTGTGAGTGGTACTGTTACCGGCTCACTACCTCCACCCCCGCCACCTTCGACAAATGGCAACTCGATAGTGGCAACCAACAGCCTTACCAGTTCGGGTACTGGTGCACAAGCAGCTCCGCCACCAGGTGGTGTACCCACTGCCCCCGGTGATTTGATAATGcctaaaatggaaaatcaagGAATGGGCGTTGATCAGAACACCCCACTGCTGGCGCCGGACGGTACCCCCATCATGGGTGGTACCCATATATGTGACATTTGCGGCAAAATGTTCCAATTTCGCTATCAACTTATTGTACATCGTCGCTATCATAGCGAACGCAAGCCATTTAATTGCCAAGTATGCGGACAGGGATTCACAACGTCGCAAGATCTGACCCGCCACGGTAAGATCCATATTGGCGGGCCAATGTTCACGTGTGTCATTTGCTTTAATGTGTTTGCCAACAACGCCAGCCTGGAGCGGCATATGAAACGTCACTCGACCGACAAGCCGTTCGCGTGCACCATATGCCAGAAGACATTTGCCCGCAAAGAGCATTTGGACAACCACTTTCGCAGTCATACGGGCGAGACGCCATTCCGTTGTCAGTATTGTGCGAAAACGTTCACACGAAAGGAACACATGGTGAATCATGTGCGCAAGCATACCGGAGAGACGCCGCATCGTTGCGATATTTGTAAGAAATCTTTTACGCGGAAAGAGCACTATGTAAACCATTACATGTGGCATACAGGTCAAACACCTCATCAATGTGACATTTGTGGGAAGAAGTACACCCGGAAGGAACATCTAGCCAACCATATGCGGTCCCATACGAACGATACGCCATTCCGGTGTGAGATATGTGGCAAGAGTTTCAGCAGAAAGGAACACTTTACCAACCACATTTTATGGCATACAGGAGAAACCCCTCATCGCTGTGATTTCTGTGCGAAGACGTTCACCAGGAAGGAGCATCTGTTAAACCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAAACCCCCTTCAAGTGCACCTACTGTACTAAGGCGTTTACTCGAAAGGATCACATGGTGAATCACATCCGTCAACACACTGGAGAGTCACCCCATAAATGCACCTACTGCACGAAAACGTTCACGAGGAAAGAGCATCTGACCAATCATGTGCGCCAACATACGGGTGAGTCGCCTCATCGTTGCACCTActgcaaaaaaacatttacacgCAAGGAACACCTAACGAATCACATCCGGTTGCATACAGGCGATTCGCCACACAAATGCGAATATTGCCAAAAGACGTTTACACGCAAGGAGCACTTGAACAACCACATGCGACAGCATTCTAGTGACAATCCACACTGTTGCAATGTATGCAACAAGCCGTTCACACGCAAGGAGCATTTGATCAATCATATGTCACGTTGTCATACCGGTGATCGACCCTTTGCATGTGAAACATGCGGCAAGAGTTTCCCACTTAAAGGTAACTTGCTCTTCCATCAGCGCAGTCACACCAAGGGACAAGAGTGTGAGCGTCCGTTTTCGTGTGAGAAATGCCCGAAGAACTTTATTTGCAAAGGTCATTTGGTGTCGCATATGCGTTCGCATTCAGGTGAGAAGCCGCATGCATGCACCATGTGCAGCAAGGCATTCGTCGAACGAGGGAACCTCAAGCGTCACATGAAGATGAATCATCCCGATGCAGTTATGCCACCACCACCGACACCAATTCCAGGAATTTTGACGCAAATCAAACAGGAGATCAATCCAATAATAATTCCTCATCAGCCTCCAACAATGCACACGATACAGCAAATAACTTCAACTGCGGGTAGCACAAGTGCAAATAATCCGGGCAATCCAGCCCTCCTGGCGCCCGGGCTCGTGCCAATGGTAACGTCTACAATAACTTCACACATAAGTCAAAAGCAACAATCccatcaacagcagcagcagcagcaacaccaaCATCAACAGCAattgcaacagcagcagcaacagctcTTACAACTGTCCATTCAACAAGCAGCTCAACATCAGCAAGCTGAACATCgtcagcaacaacagcagcaacaacagcagcagcaacaacatcaacagcagcagcagcaaagtcatcagcagcatcaacaacagcagcaacaacaacagcaagcTCAACAACAGCAATCACAGCATCAACAGCCACAACCGCCACCAGTGCCGATAGCTCTAATTGGAACCGACCCCTCGGCGATAGCACGCGCTGCCATGCAATTGCAACATCTACCAACCAATGTCGAACAACATCCTGTGGTGTACTAG
Protein Sequence: MNSDHTAAPGESSSNPNDSQQSRHSPQQQAQQQQQQQQQQQQQQQHHQHQQQQQQQQQQQQQQQQQQQQQQQQLAHQRHPQQLNEQHVQQQHHENPGIGGVIQPVGGIDSDVSKQQHQHHHPSLVTGTQHLGKYWVVTNLFQGTGQPPYNIGVTPTTSAVPTLPPPITSHSSASAAKSGNSKQQQQQDQQHAPNSHTQTPAHIVSSVGATSLQIPNPMITNASLNQQQLPNGTIIAGPRHPDSLHVHGTMSSDDNRHVSHGMQDIKEEKPFANGKQNNHMVAHVNPASSVSSKMNSGSGGGNNPQSAEPSGGQMVNKLQAGGPVGEQQELGNSKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISSHTVTHPTTNVSTSNAGGNTSVSGTVTGSLPPPPPPSTNGNSIVATNSLTSSGTGAQAAPPPGGVPTAPGDLIMPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPIPGILTQIKQEINPIIIPHQPPTMHTIQQITSTAGSTSANNPGNPALLAPGLVPMVTSTITSHISQKQQSHQQQQQQQHQHQQQLQQQQQQLLQLSIQQAAQHQQAEHRQQQQQQQQQQQQHQQQQQQSHQQHQQQQQQQQQAQQQQSQHQQPQPPPVPIALIGTDPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00315368;
80% Identity: -