Flac003806.1
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- Hr39
- Assembly
- GCA_951449985.1
- Location
- OX602112.1:2411149-2413296[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-48 1.2e-44 153.7 0.0 238 408 12 183 11 183 0.95
Sequence Information
- Coding Sequence
- ATGTCAAATTCCAGTTCTATTGGTCCTGGGAAGGAGATCGACGATCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGTTGTTGGTGTTGTCGTGTTGCTACCGCGGCGTCAGCACTCCAGGAGAAGTGAGGGTCGGCGGCGGCCGCGGCATCACTCTGCATCAGAGTGCCAAGTTGGGTTTAACACCATGTATAGAGCGCATGTTGAGCTTCACCGACCATTTGAGAAGACTGAGGGTAGACCGATACGAGTACGTCGCCCTCAAAGTTATCGTACTACTTACATCAGATGCGCCAGAACTACGAGAGTCTGAGAAGGTGCGAGCATCGCAAGAGAAGGCGTTGGCAGCTCTTCAAGCTTACATCGCAGCACATTCCCCCTCGACTCCGGCCAAGTTTGGAGAGTTATTGCTGCGTATACCCGAGCTGCAGCGCACTTGCCAGTTCTTCATGCAAGTCGGCAAGGAAATGCTGAACCCGGCCAACAAGAGCAAGGACGGCGACGGGCCCAGCTTCAACCTGCTCATGGAACTGCTCAGGGGAGATCATTGA
- Protein Sequence
- MSNSSSIGPGKEIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELRESEKVRASQEKALAALQAYIAAHSPSTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00724033; iTF_01209328; iTF_00827102; iTF_00827027;
- 90% Identity
- iTF_00724033; iTF_00827027; iTF_00634594; iTF_00913666; iTF_00432260; iTF_00634534; iTF_00032968; iTF_00825800; iTF_00935785; iTF_00250570; iTF_00207051; iTF_00207084; iTF_00858604; iTF_00390509; iTF_00825901; iTF_00913709; iTF_01358927; iTF_01010416; iTF_00044561; iTF_00206130; iTF_00033011; iTF_00858675; iTF_00206196; iTF_00935828; iTF_00250517; iTF_01208246; iTF_01358966; iTF_00432343; iTF_01208378; iTF_00666619; iTF_00044606; iTF_00666590; iTF_00827102; iTF_01010494; iTF_00390431; iTF_01182955; iTF_01183005; iTF_01490188; iTF_00236685; iTF_00236723; iTF_01490234; iTF_00112589; iTF_00112554; iTF_01172438; iTF_01172488; iTF_01331639; iTF_01331790; iTF_01528408; iTF_01528354; iTF_01335994; iTF_01336025; iTF_01209403; iTF_01209328; iTF_00341375; iTF_00341431;
- 80% Identity
- iTF_00724033;