Eads018272.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- bab2
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000094.1:390671-392646[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-14 6.5e-12 45.7 0.1 3 45 361 403 359 403 0.92 2 2 2.2 9.3e+02 0.4 0.6 6 17 470 482 466 485 0.81
Sequence Information
- Coding Sequence
- ATGGGCACGGCGCAGCAGTACTGCCTACGGTGGAACAACCACCGTTCGAACCTCCTCACCGTCTTCGACGAGCTGCTCCACAACGAGGCCTTCACCGATGTCACACTCGTCTGCGACAGCGGCAGCCCAATTCGGTGCCATCGGATGGTACTCGCCGCCTGCTCTCCCTATTTCCAAGGCCTTTTCACAGATCTGCCCTGCAAACACCCCTTAGTTGTCCTCAAAGACGTCAAGTACTCGGAAATTAAAGCCATACTAGAATACATGTACAGAGGAGAAGTCAATGTGGCGCAAGATCAATTGGCCGCTCTGTTAAAGGTAGCGGAAGCCCTCAAAGTTAAAGGCTTAGTAGAAGAGAACAGGTCAAATAAAAGCCCTAAATACGAAGAACTCATCGATCATTCACCTTCCATCACCACCTCCAATTCGGTGATGCAAAGCACCGTCCACAGTAGCAGCAACAGCTCACCTCCGCATTCGACCAACGCCATGTACAAAAACCCGTATAACTTATACAACAAATCCCAAGAGCACACCCCCAGGATGAACTTACCCGTGTGGGCTGTACCCGGACTACCTCTACCTCCACATTCATCTTCTGTGCCTACGCCTAGCCACCCCCACGCCGCCGCCACTGCCGCCGCGGCCATGTTCAGCAGCTGCTACGAAGCAGCCAGCTCGGACATGTCGCCTTTGAAAAGGAAGAAACTTTCCAGTTTGCTTATGAACAGAGACACGCCAATCCTGAGGACGGTGCTGGGCCAAGGGCAGCAGGGCCAGGGACAGGGTCAGGCCGATTCGTCCCAACCTGTTAGCCTGGTATGCCACCCCGACAGCGCCGAACAGTCAACAGGAAACGAAGACCGCACCAAGCATATGAAAAACGAGCCCTTAGAAGATGCTCAATCTCCATACACAGACTTCACGCCAATGAACGACGAGGAGGATAAATCCAAGCTTGCCATTCCTTCATCTTCTCCCCAGTCCTTCTCTCATGAAATCAGGGGAGTAAGATCGGGCATAGCCACTTACGTTCCAACCGAGAAACCCGAATGGAGACGTTACAAGCAATACACGAGGAACGACATAATGTCTGCTATCGAAGCGGTAAGAAACGGGATGTCAGCTTTACAAGCCGCCAGGAAATACGGGGTACCGTCCCGAACGCTCTACGACAAGGTGAAGAAACTAGGGATAACCACAAGTAGACCCTTCAAAAGGGGTAGCAACGGCAGTTCCGCTTGCTTCCCCTACGGTACCGGCTCTCCCTACGGGGGGCATTTATCCGAGACCGATGAAGGACCGATCAACAATAATTCCGCACTGATAGACGCCACCACGTTCCTGCAACATGCCATGGAAAACCGTGGGGGAGACGAAAGGGAGGCTTTGGCCGCCATGGCGGCTGCGGCTGCGGCCCACGCAGTCGCCTCGGGTCATTCTACCAGTCCAAGCAACCATGGTCGAGCGAGAAGTCCAAGCCCAAGTCCCACGATGTTGAAATACATGACCCATGGCAGTATGACTCCATCCCCAGCTCCCCACAGTCACAGCGAAACTAATGGAAGTTCCGAACGAGAACAcgaggaagaggaggaccaggtGGAAGATTTGTCCATAGGACGAAAAGAGTCCAGAGAATCTGGAGTTATCATGCCGCCTAGGAACCAGGTGTCCACCATCATCAAAAAGGAAGAGATGCTGATCGATTGCATTAAAGAAGAAACAGCTAGGAGAGAGGTAAGCATTGAGGGAGATGGAGAATGA
- Protein Sequence
- MGTAQQYCLRWNNHRSNLLTVFDELLHNEAFTDVTLVCDSGSPIRCHRMVLAACSPYFQGLFTDLPCKHPLVVLKDVKYSEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSNKSPKYEELIDHSPSITTSNSVMQSTVHSSSNSSPPHSTNAMYKNPYNLYNKSQEHTPRMNLPVWAVPGLPLPPHSSSVPTPSHPHAAATAAAAMFSSCYEAASSDMSPLKRKKLSSLLMNRDTPILRTVLGQGQQGQGQGQADSSQPVSLVCHPDSAEQSTGNEDRTKHMKNEPLEDAQSPYTDFTPMNDEEDKSKLAIPSSSPQSFSHEIRGVRSGIATYVPTEKPEWRRYKQYTRNDIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSACFPYGTGSPYGGHLSETDEGPINNNSALIDATTFLQHAMENRGGDEREALAAMAAAAAAHAVASGHSTSPSNHGRARSPSPSPTMLKYMTHGSMTPSPAPHSHSETNGSSEREHEEEEDQVEDLSIGRKESRESGVIMPPRNQVSTIIKKEEMLIDCIKEETARREVSIEGDGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_01226547;
- 80% Identity
- iTF_00722223;