Eads001648.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- -
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000002.1:4926616-4929763[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.8e-11 1.6e-08 34.8 0.0 1 39 342 381 342 385 0.90 2 4 1.3e-12 5.8e-10 39.5 0.1 1 39 396 434 396 437 0.95 3 4 3.6e-18 1.5e-15 57.3 0.0 1 45 451 496 451 496 0.98 4 4 5.1e-16 2.2e-13 50.4 0.0 1 39 503 542 503 545 0.94
Sequence Information
- Coding Sequence
- ATGACAAAGCTGAGTGCGGTCCTGGCGCCAGCCGAGTTTCCCAACGACCGCACTCTCTCTCCGGAACAAAGAATGCTCCCAGCCCTTtccctgaaaaataaatataacgaACGCGACGGGGATTTCCTCCTAGTTTTCCGCGTACGGTTTAAACCGCTCTTATTTCTCGAGCAAATCGATGGGATCATAGCATTTTCCACATTCAAGTCGATCCTGCGAACGGCGGACCAATTAAAGATCAAAGGTCTGTGCGAGGCGCCCGACGACAAAGAAAACACCGGCTCGGCCCTGCCCCTCTTCTACAAAGGTGGCCGTAAGTCCGCCTCGCCCAAACACTTCCGGCTGGGCGACCGAAGGGCGACCAAATACCGGCGCACCAGCCTGCAGGAGCGCCTCTCGTCGGATGAGCAGCAGAAGAGCCGCGCGTCGGAGGAGGACGAGGAGCACGATGACATGCCAGTAGCTCTGGATGAGCACAAGAGAGGCAGGCACCAGCCCGAACAGATCAAACCGCTCAACATGAGCAACCATGGACTCATCGCTGGACAGACAATCTTCTCCCAGTTCGGAGTGGACACGGACGACTTCCCTCCGGAACCGCTCGCGCCATCGGCTATCCCGGTCGGGCACGTGGACATGTCGGACCATTCGCCCACCCGCTCCCTGCTGACAAACACCCCCATCCATCGGACGGACATATCGGACTCCACCAAGTACACGCTGGATATCAAGAAGGAGGCCGATATCAAGTTCGAAACGTTGAGGTCGTACGACCAAGACTCCTTGCTGGACATGGAGTCGCACATGTCGGGGCCGGACCGTTCGATGGACAGCCACGAGGAGTGCGACAGGGGCCTGCACCCTGGCATGATGGTGCAGCAGGATTTCGTCGGGATGATGCCCGGCGTTTCCAATAGATTAGATGTAAATAACGACGAACAAGTACCTGGAAGCAAAAACAACGGCCATAATGAGAACTTGCAGCACACCCCGCGGGCGCACGGCGGCGGACCAAAAACCTGGACCCAGGAAGACATGGATATGGCCTTGGATGCCTTACGAAACCACAACATGAGCCTTACAAAGGCCTCAGCGACTTACGGTATTCCCTCCACTACTTTATGGCAGAGAGCGCACAGACTAGGCATTGATACCCCGAAGAAAGAAGGGCCGACGAAGTCTTGGACCGAAGAGAATCTCAACAGCGCCCTAGAAGCTTTGCGGACGGGTACGATATCGGCGAACAAAGCGAGTAAAGCGTACGGTATTCCCAGCagcaccttatataaaatagcGAGACGAGAAGGAATAAGACTGGCGGCGCCGTTCAACGCGGCCCCAACCACTTGGACGCCGGAAGATTTGGAAAAAGCTTTAGAGTCTATAAGGACGGGGCAAACGTCGGTGCAGAAAGCGTCGACGGAGTTCGGGATACCGACCGGGACGCTGTACGGCAGGTGTAAGAGGGAAGGGATCGAATTGTCTAGGTCGAACCCCACGCCTTGGTCCGAGGACGCGATGGGCGAAGCGCTAGAGGCTGTGAGGTTGGGGCACATGTCGATAAACCAAGCGGCGATTCACTACAACCTGCCTTACTCGTCGCTGTACGGAAGGTTCAAGCGAGGGATAAAGTACGACTCTGACAGCATAGAAGTCAACCAGGACAGCCAGTCGCAGATGGACGCCCACTCCTTCGGCATGGACTACAGCGCGGCCACGCACCAACAAATCCAGTACCAGAACCAGAGCAGCTGA
- Protein Sequence
- MTKLSAVLAPAEFPNDRTLSPEQRMLPALSLKNKYNERDGDFLLVFRVRFKPLLFLEQIDGIIAFSTFKSILRTADQLKIKGLCEAPDDKENTGSALPLFYKGGRKSASPKHFRLGDRRATKYRRTSLQERLSSDEQQKSRASEEDEEHDDMPVALDEHKRGRHQPEQIKPLNMSNHGLIAGQTIFSQFGVDTDDFPPEPLAPSAIPVGHVDMSDHSPTRSLLTNTPIHRTDISDSTKYTLDIKKEADIKFETLRSYDQDSLLDMESHMSGPDRSMDSHEECDRGLHPGMMVQQDFVGMMPGVSNRLDVNNDEQVPGSKNNGHNENLQHTPRAHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDSIEVNQDSQSQMDAHSFGMDYSAATHQQIQYQNQSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01289681;
- 90% Identity
- iTF_01014164;
- 80% Identity
- -