Eisc014175.1
Basic Information
- Insect
- Exephanes ischioxanthus
- Gene Symbol
- znf423
- Assembly
- GCA_958510785.1
- Location
- OY294021.1:22072080-22089487[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.1e-05 0.00091 19.9 1.5 1 23 97 119 97 119 0.98 2 21 0.62 52 4.9 3.9 1 23 125 147 125 147 0.97 3 21 1.4e-06 0.00012 22.7 4.1 1 23 153 175 153 175 0.99 4 21 0.00029 0.024 15.4 0.2 1 23 181 203 181 203 0.99 5 21 5.3e-05 0.0045 17.7 0.8 1 23 366 389 366 389 0.97 6 21 0.32 27 5.8 0.0 2 23 400 422 399 422 0.88 7 21 0.27 23 6.1 0.1 3 23 500 520 499 520 0.97 8 21 0.023 1.9 9.4 0.1 3 23 536 556 535 556 0.96 9 21 0.00084 0.071 13.9 0.3 1 23 565 588 565 588 0.92 10 21 4.8 4.1e+02 2.1 0.2 1 23 593 616 593 616 0.91 11 21 7.7 6.5e+02 1.5 0.1 10 23 649 663 648 663 0.94 12 21 0.89 75 4.4 2.2 2 23 690 711 690 711 0.96 13 21 0.024 2 9.4 0.0 1 23 716 739 716 739 0.95 14 21 6.9 5.8e+02 1.6 0.2 1 23 809 833 809 833 0.82 15 21 6.5e-05 0.0055 17.4 1.0 2 23 849 871 848 871 0.96 16 21 1.5 1.3e+02 3.7 0.7 1 12 880 891 880 903 0.76 17 21 0.1 8.4 7.4 0.3 2 23 1133 1155 1133 1155 0.94 18 21 0.12 10 7.2 0.4 1 23 1164 1187 1164 1187 0.96 19 21 1.7 1.4e+02 3.5 1.0 2 23 1200 1221 1199 1221 0.94 20 21 0.0055 0.47 11.4 0.2 2 23 1230 1252 1229 1252 0.94 21 21 4 3.3e+02 2.4 1.3 1 23 1259 1282 1259 1282 0.93
Sequence Information
- Coding Sequence
- ATGTTGTTCAAGGGAAATAGTTCGCGTTTGGAATTGCTGATCGGAAAGATTCAGGCGCACAAGGaatcgccgtcgccgccgcggGACGACAAGTGCGTTAACATTGCCAAAGATGTACTTGGGACAGGCAGCTCGTCCTGGCACAGCGAGGATGGGGTGGCGAATTCGCGGAGAGGCGGCGAAACCCCGTCGTCCTGCGCCACACCGACATCCGCGAGTTTCCCATCGGAGCCGGAAGTAGACGCGGAAATCGGCATAAACGCCGAGGGCCACAATCCAACGGCGCCGTATCCTTGCCAATTTTGCGACCGAACCTTTCCGAGACTCAGCTACTTGAAGAAGCACGAACagAGTCACGGCGACCAAATGCCGTATCGTTGCAGCTGGTGCGCAAGATTGTTCAAGCACAAGCGCAGTAGAGATCGTCACGTCAAGCTCCACACCGGCGATCGGCGATACCGTTGCTCTCACTGCGAGGCTGCGTTCTCCAGAAGCGATCATCTGAAAATTCACATGAAGACTCATGACAACCAGAAGCCCTACCAGTGCACAGCGTGTTCCCGTGGTTACAACACAGCGGCGGCACTGACGTCGCACATGCAGTCCCACAAGAAGAATCAGTCACCGGGTCAGAGCGCAAAATTGGAGCTGGACTACGGTCGTCGAAGCGTCTCGTCCCACAGTACGTCATCGCCGCCGATTCCAAACTCGCCGTGTCCGAGCTTCGGTACCGGCTTGACTCTGAAGAATTCATTGAAATCCCAACAATCGTCGTACATCAACAGCAACGGTGCGCCAACGACGCCCGTCCTCAACTCGCCGTTGAAACTCGCGTGCATGTATTGCACCAGGGACTCGTTCACGAGTATGCAACAGCTGCAGATCCACGTTAACGCGATGCACCAGTCGATCCTGAACGGTGAAAATTTATCaatgccgtcaccgggccAGAGTAATCGCGAGGCGAACACCCTTAGATCAAGAGAATCTGACAAGTTCGACGGAAACCCGAGGAAGGACGGCGAAACGATCTACCGTCGCGAGGATCGCGATAAATCGCCTCAACGCGAGAAGGCGGACGCATTGGAAAATTCATTCTCGTGCGGTCAGTGCACCATGAAGTTCTCCAATCTgagcagtctgcgggatcATCTGATGACGATTCATCGTAACGACGGTTTCGGGCCGACATTGATGATGTGTCCTCTGTGCGGTATCCCTTGCGCCACAGCGGCCACCTACGCCGAGCACTATGTGCTCCAGCATTGCGAGAGTCGATCGCGATATCCGTCGAGAGACCCGGTTCGCAGAGATTGGGACGAAACTAAATCGAACGGCGGTCATGAGGCGATCCGCCCGATCTCCAAGGCCCAAGGAGCCACGATCGCAAGATCGTCGGAGATCGGACCATTGGAACCGGCGGATTTGACAAAgaagcagcaacagcagcagcattCGAGACCCGGTGATTCGGGCTACTCGGCTGGGACGTTGCTGTGCGGTCAGTGCGGAGCAGCGTTGAAGGATTTCGAGTCGTTCAGGGAACATCTAGCCAGACATCTTCAAGCCGATCAACACAGCAATGAGCCCGTTCCCCGTAATCCTTGTCCGAAGTGCGAGGCTACTTTTCCGGAACGCGACGACATGCTCGTTCATCTGACGAAGCACTATCTCGGACAGACGACGAAGGAGTACGCCTGCGGCGCTTGCAAGAAATCCTATCCTCATCCGGATCTCTTGCAGCGACATCTGTTGGACACCCACGCCCATCATCTTTACAGATGCGCCCTCTGTCGTGACACTTTTGACTCGAGAGTCGCGATACAGGTGCACTTTGCTGTCAAGCACAGTCAGGAGTGCAGGATCTATCGTTGTTCGACATGCAGCGTTTCGAACAACGAGAATTCACCCGGAAACACACCCGGTGGCGAGGGACGAGGCTACTTTCGCAGCGAGGCCGAGATGACGAATCACGTGAGGACCGTTCACGCGCCACCCAGCGCCGTCAATGAGAGCCCCCTGCCGAGAAGTCGAGCCTCCACTCCGGGAATCGCCGTCAACAATCCTCGATGCGTTTTTTGCGGTATCTGCTGCAACACAGATCTTGAACTGCAATTGCATCTCGCTAGTCACTCGACTAGCTTGTACCGATGTCCGTTATGCAGGGAAGGATTTCCTGTGGAGTTCTTGCTCGACCGGCACATAGCGCAGGCTCATCGGGTCAACAGCGAGAGGAACGATGGGAGGGACAACGGAAGGAGCCACAGAGCTTCGAGATCGCAGGAGGAAACGCAGTCAAAGTCTCAAAAGCGCGGACGGTCGCCGGCCTCGAGCAACAACAATTCTCTGAATCAGCGCGACAACAACACGAAGCGTCCGAATTACGGGCCGGCGAACGGTACGAGTGTGATGACCTCGGTCCACCACACTTGCGAGCTCTGCGAGCGCGGTGAATTCGCCACCGAAGCCGAACTTCTGGCtcacaaaaaattgattcacaCACCGGTGAAGCTTCAATCCAAGTCTCTCACCTCGTTGAGCATGACCTGCGCCTATTGCGGCGAGGTTTGTCGTTCGCGAAGCGAACTTGAGTCCCATACGAGAATTCAGCATGCCTCCAATGAGCCCGGCGGACGTCACAAGTGCAACATATGCGACGAGGTTTGTCCATCCGGTGGTATACTGGCGGAGCACAAACTTCAGAAACATTGCAAAATCCAATTGAGCGACTGCTGCATAGTTTGTCGGGGCTCGCTGGGAAACGAGACCCAATTTATGGACCATCTTCAGAGACACAGTCTCGAAGGCACCGACAATCAGCAAAGATTGGACAACGCTGTCGGTCATCTTCCAGCGGCTTGCGTCGTTTGCAGACAAACTCTCATCAGCGATTTCGAGTGTCGTCTTCACGCGAAACATCATCTGAGGGGTACGTCGGGTCTTCAAAGTTCGAGTTCCAGTCCAAGTCCCAATCAGCCAAAAACCCAACAGAAGctgcagcaacaacaacaacgacaacaagaacaacaacaacaacaacaacaactaccaccacaacagcagcagcaacagcaaacGGCGCCAAGCTGTTGTCTGTGTCTGAGAGAGTTTAGCGCCGATGACTTCGTCAGTTTGCCATCGAATCCAGCGGGAACCGGCGGTCCATCATTGAGAGTATGCAAATCCTGCTACGTGAGACATTCGCAGGGATTGCCGATACTCAGCTCGCCGTACGAACACGCAAGGCCTTCGCAAAGCGAAAAGACGGCATGGTCGGTGGTTGGCAAGGAGCCGACCAGTTGGGAAGTATCGAGCGATCCGTGGGACAACGAAAGGTTCTGCAAGGCGGAGAAGAAAAGTCGAAGCGCAACAGGCTCAAAGGATCTCGACGAGAACAGATGCGATGAGTGCGGAATAAAGTTCGAAGGTTCCAAGGAAGCCGAGAGTCACAGGACCAAGGAACATGGGCAAAATTGTCGAAACAACACCTACACGTGCATACAGTGCCAGATGTCTTTTCCGAGCGAGGAAAAAATACAGCAGCATGTGAGAAAGGAGCACCTCGAGTCGCCGAACAAAGCGTCGATGGATGCACTGCGTTGCCATCTATGCCACTTCGAGGCTAACAGTCCTCTTCAACTTCAGGGACACCTTATCGAACACACTTTTGCTGGATGCGCCGGTCTTACTTGCTACATTTGCCAGGCGCTATTCACGACTTCTATCGCTCTTCAGaatcaCATGCTGCAGCAGCACGGACTTGGGGCTCGTCCCTACGACTGCAGTTCCTGCAGTTTAAAGTTCTTCTTCCGAATCGAATTGGACCATCACGCGGTAACGGTTCACCGACGCAAGGAGAGCTCTTCGCCTTCGGTGGACGTGGGACAGAACCGCGCAACCGAGGATTGGACCGGGGATACTCACGAGGACGAAGATCGATTGGAGAACATTACGGTGAAGGAGGAAGTCGCCAACAGTCCTGAAGACGAGGACGTCAACGTGGACGACAACGTCGATCAGACTGACGAAAATGAAACTAAGCACGAGGAACGCAAGCTCGTGAATGCGAAAGAGGAACCTTTCGCGATGACACCGCATGGGGAAGACAAAATCGAATGCTGA
- Protein Sequence
- MLFKGNSSRLELLIGKIQAHKESPSPPRDDKCVNIAKDVLGTGSSSWHSEDGVANSRRGGETPSSCATPTSASFPSEPEVDAEIGINAEGHNPTAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKNQSPGQSAKLELDYGRRSVSSHSTSSPPIPNSPCPSFGTGLTLKNSLKSQQSSYINSNGAPTTPVLNSPLKLACMYCTRDSFTSMQQLQIHVNAMHQSILNGENLSMPSPGQSNREANTLRSRESDKFDGNPRKDGETIYRREDRDKSPQREKADALENSFSCGQCTMKFSNLSSLRDHLMTIHRNDGFGPTLMMCPLCGIPCATAATYAEHYVLQHCESRSRYPSRDPVRRDWDETKSNGGHEAIRPISKAQGATIARSSEIGPLEPADLTKKQQQQQHSRPGDSGYSAGTLLCGQCGAALKDFESFREHLARHLQADQHSNEPVPRNPCPKCEATFPERDDMLVHLTKHYLGQTTKEYACGACKKSYPHPDLLQRHLLDTHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSTCSVSNNENSPGNTPGGEGRGYFRSEAEMTNHVRTVHAPPSAVNESPLPRSRASTPGIAVNNPRCVFCGICCNTDLELQLHLASHSTSLYRCPLCREGFPVEFLLDRHIAQAHRVNSERNDGRDNGRSHRASRSQEETQSKSQKRGRSPASSNNNSLNQRDNNTKRPNYGPANGTSVMTSVHHTCELCERGEFATEAELLAHKKLIHTPVKLQSKSLTSLSMTCAYCGEVCRSRSELESHTRIQHASNEPGGRHKCNICDEVCPSGGILAEHKLQKHCKIQLSDCCIVCRGSLGNETQFMDHLQRHSLEGTDNQQRLDNAVGHLPAACVVCRQTLISDFECRLHAKHHLRGTSGLQSSSSSPSPNQPKTQQKLQQQQQRQQEQQQQQQQLPPQQQQQQQTAPSCCLCLREFSADDFVSLPSNPAGTGGPSLRVCKSCYVRHSQGLPILSSPYEHARPSQSEKTAWSVVGKEPTSWEVSSDPWDNERFCKAEKKSRSATGSKDLDENRCDECGIKFEGSKEAESHRTKEHGQNCRNNTYTCIQCQMSFPSEEKIQQHVRKEHLESPNKASMDALRCHLCHFEANSPLQLQGHLIEHTFAGCAGLTCYICQALFTTSIALQNHMLQQHGLGARPYDCSSCSLKFFFRIELDHHAVTVHRRKESSSPSVDVGQNRATEDWTGDTHEDEDRLENITVKEEVANSPEDEDVNVDDNVDQTDENETKHEERKLVNAKEEPFAMTPHGEDKIEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00905631; iTF_00058950; iTF_00058190; iTF_01364889; iTF_00059676; iTF_00397562; iTF_00841347; iTF_00398334;
- 90% Identity
- iTF_00905631; iTF_00058950; iTF_00058190; iTF_01364889; iTF_00059676;
- 80% Identity
- -