Carm034780.1
Basic Information
- Insect
- Cryptus armator
- Gene Symbol
- znf423
- Assembly
- GCA_963971235.1
- Location
- OZ020241.1:15373367-15385168[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1e-05 0.0015 19.9 1.5 1 23 97 119 97 119 0.98 2 21 0.58 86 4.9 3.9 1 23 125 147 125 147 0.97 3 21 1.3e-06 0.0002 22.7 4.1 1 23 153 175 153 175 0.99 4 21 0.00027 0.04 15.4 0.2 1 23 181 203 181 203 0.99 5 21 5e-05 0.0074 17.7 0.8 1 23 366 389 366 389 0.97 6 21 0.44 65 5.3 0.1 2 23 400 422 399 422 0.88 7 21 0.25 37 6.1 0.1 3 23 497 517 496 517 0.97 8 21 0.014 2.1 10.0 0.1 2 23 532 553 532 553 0.96 9 21 0.0015 0.23 13.0 1.4 1 23 562 585 562 585 0.92 10 21 4.6 6.8e+02 2.1 0.2 1 23 590 613 590 613 0.91 11 21 6.7 1e+03 1.6 0.1 10 23 645 659 643 659 0.93 12 21 0.66 97 4.8 2.0 2 23 686 707 685 707 0.96 13 21 0.0061 0.9 11.2 0.0 1 23 712 735 712 735 0.95 14 21 4.6 6.8e+02 2.1 0.1 1 23 806 830 806 830 0.81 15 21 6.1e-05 0.0091 17.4 1.0 2 23 846 868 845 868 0.96 16 21 1.4 2.1e+02 3.7 0.7 1 12 877 888 877 900 0.76 17 21 0.049 7.3 8.3 0.1 2 23 1110 1132 1110 1132 0.95 18 21 0.043 6.4 8.5 0.7 1 23 1142 1165 1142 1165 0.96 19 21 2.6 3.9e+02 2.9 1.0 2 23 1178 1199 1177 1199 0.94 20 21 0.0052 0.77 11.4 0.2 2 23 1208 1230 1207 1230 0.94 21 21 0.22 33 6.2 1.5 1 23 1237 1260 1237 1260 0.95
Sequence Information
- Coding Sequence
- ATGCTTTTCAAAGGCAATAGTTCGCGTTTGGAATTGCTGATTGGAAAAATTCAGGCGCACAAGGAATCGCCCTCACCGCCGCGGGACGAAAAGTGCGTTACGATTGTCAAAGaCGTTCTTGGCACAGGTAGTTCATCGTGGCATAGCGAAGATGGGGTACCAAATTCAAGACGAGGCGGCGAAACACCGTCGTCATGCGCCACACCGACTTCTGCGAGTTTTCCGTCGGAACCGGAAGTTGATACAGAAATTGGTATAAACGCTGATGGCAACAATACCGCGGCGCCCTATCCGTGCCAATTTTGCGACAGAACTTTTCCCCGGTTAAGCTACTTGAAGAAACACGAACAGAGTCACGGCGATCAAATGCCGTATCGTTGCAGCTGGTGCGCGAGATTATTTAAACACAAGCGAAGCAGAGATCGTCACGTGAAGCTTCATACCGGGGATCGAAGATATCGTTGCTCTCATTGCGAGGCCGCGTTCTCCAGAAGCGATCATCTGAAGATTCACATGAAAACTCACGACAATCAGAAGCCTTATCAGTGCACAGCTTGTTCACGTGGCTACAACACCGCAGCGGCTCTAACATCGCACATGCAGTCGCATAAGAAGAATCAGTCGCCTGGGCAAAGCGCAAAACTGGAACTGGACTACGGTCGCCGAAGCGTCTCATCCCATAGCACGTCTTCACCGCCAATTCCTAATTCTCCGTGTCCGAGTTTCAACCTTACATTGAATCTGAAGAATTCATTCAAATCCCAACAATCCTCATACATGAACAGCAACGGGACTCCAACAACGCCAATCCTAAATTCCCCATTGAAACTCGCGTGCATGTATTGCACCAGAGACTCCTTTACCAGTATGCAACAACTGCAGATGCACGTTAACGCGATGCATCAGTCGATTCTGAATGGTGAAAGTCTGGCGATGCCATCACCGGGGCACAATCAGCAAGAAGCGAACAATTCGCGTTCAAGAGAACCGGACAAATTCGACAGAAGCACCAGAAAAGATCATGAGACGACTTACCGTCTGGAAGATCGCGAAAAGTCAACAGAACGAGAAAAGGGAGAAACcattgaaaattcattttcctGCGGTCAATGCACGATGAAGTTTTCCAATCTCAGCAGCCTACGAGATCACTTGATGACCATTCATCGCAATGATGGTTTCGGTTCAACTCTGATGATGTGTCCCCTCTGCGGCATTCCCTGCGCCTCCGCAACTACCTATGCCGAGCACTACGTTCTCCAACATTGCGAGAGTCGATCGAGAGTTTCGTCGTCGAAAGATCCATTTCGCAGGGATTGGGAGGAAGGTAAATCGAACGGTGCCGGTCACGAATCAATTCGCGCGGCTGCAAAGTCTCAAAACGTGATCGCAAGATCTTCGGAGATTGGTCCCTCGGAACCGGCGGATTTGACGAAAAAGCAACAATCCAAATCCGGCGAATTTGGTTACTCAGCTGGAACATTGCTGTGCGGACAATGCGGTGCTGCGTTAAAGGATTTCGAATCATTCAGGGAACATCTCGCCAGGCATCTTCAAGCCGATCAACAGAGCAACGAAATCGTACCGCGAAATTCATGTCCAAAGTGCGACGCCGTGTTTCCCGAACGGGAAGAGATGTTGGTACATCTAACGAAGCATTATCTCGGACAGATGACCAAGGAATACGCTTGCGGTGCTTGCAAAAAGTGTTATCCACATCCGGATCTCCTTCAGCGTCATCTGCTGGATACGCATGCGCATCATCTGTATCGATGCGCGCTTTGTCGTGATACGTTTGACTCGAGGGTCGCGATACAAGTCCACTTTGCTGTTAAGCACAGTCAGGAATGCAGGATCTATCGTTGCTCGACATGCAGCGCATCTAACAATGAAAATTCACCGGGGAACACACCGGGTGAGGGAAGATGCTACTTTCGCAGCGAAGCCGAGATGAACAATCACGTTAGAACAGTCCATGCGCCCCCTACTGGCGTTAATGAGAGCCCATTGCCGCGAAGTCGGGCATCAACTCCTGGCATCACTCCCAACAATTCTAGATGCGTTTTTTGCGGTATATGTTGCAACAACGATTTGGAACTACAATTGCATCTTGCTAGTCACTCCACCAGCTTGTATCGATGCCCCATTTGTAGAGAAGGATTTCCCGTGGAATTTCTACTCGATAGGCATATATCACAAGCTCATCGAGTCAGTAGCGAGAGAAACGACGGAAGGGAAAATGGAAGGACCCACAGAGCTTCCCGATCGCACGAGGAAACGCAGGCAAAGCCCCAGAAGCGTGGACGTTCTCCAGCCTCGAGTAACAACAATTCCTTGAATCAACGGGACAATAACACAAAGCGTCCAAATTACGGCCCAACAAGCAACGGCCCAAACCCGATGACTTCTGTCCAACATCCTTGCGAGCTCTGCGAACGCGGCGAATTCGCAAGCGAAGCCGAACTTCAGGCCCACAAAAAATTGGTTCACACGCCGGTGAAGATGCAATCGAAATCTCTATCATCGCTCAGCATGACTTGCGCTTATTGCGGTGAGGTATGTCGTTCGCGAAGCGAGTTAGAGTCGCATACGAGAATTCAACATGCGTCGAACGAACCCGGCGGACGTCATAAGTGCAACATATGCGACGAGGTCTGTCCATCGGGTGGAATACTCGCAGAGCACAAACTTCAGAAACATTGCAAAATCCAATTGAGCGATTGTTGCATCGTGTGTCGGGGTTCTTTGGGAAGTGAGGCGCAATTTATGGAACATCTTCAGAAACACAGTCTGGAAGGTGCCGATCCGCAACAGAGACTGGACAATGCTGTTGGCCATCTACCAGTCGCTTGCGTCGTTTGCAGACAAACGCTCATCAGCGATTTGGAATGTCGTCTTCATGCGAGACATCATCTTAGGGGAACTTCGGGCTTTCAAAGCTCGAGCTCCAGTCCAAGTCCCATTCAGCCAAAAGCtcaacaacagcaacagaaACAACAGCAACAAACAGCTCTGAGTTGTTGTCTATGTCTGCGAGAGTTCAGCGCTGATGACTTCGTCAGTTTGCCATCTAATCCTGCAGTTACTGGTGGTCAGTCGTTGAGAGTTTGCAAACCCTGTTACGTCAGACATTCTCAAGGATTACCGATACTGAGCTCACCGTATGAACACGCGAGGCCATCGAAAAGCGAAAAGATTCCTTGGCCAACGGCTACCAAGGAGCAGATCAATTGGGAAGGATCCAGCGATCCGTGGGACAACGAAAGGCTCTATAAAGCCGAGAAAAGCAGTCGAAACGCAACGGGTTCTAAGGATTCTGATGACAACAGATGCGAGGAGTGCGGAATTAAGTTTGAAGGCTCCGAGGAAGCTGAGAATCATAGGATAAAGGAACACGGAGGGAATTGTCGAAATTCCAACACCTATACGTGTATACAATGCCAGATGTCCTTCTCAAGTGAGGAAAAAATTCAGCAACACGTTAGAAAGGATCATCTGGAATCGCCGAACAAAGCATCGATAGACGCGTTGCGTTGTCATCTTTGCCATTTCGACGCTAACAGTCCGCTTCAACTTCAGGGACATCTGATTGAACATACGTTTGCTGGTTGCGCCGGTCTAACTTGCTACATTTGTCAGGCGCTTTTCACGACTTCTATCGCGCTGCagAATCACATGCTTCAACAGCACGGACTCGGCGCGCGTCCCTACGACTGCAGTTATTgcagtttgaaatttttttttcgcatcgaatTGGATCATCACGTGGTAACGGCGCATAGACGGAAAGAAAGTTCGTCACCGTCCGTCGACGTCGGACATAATATTAACACCGAGGAATGGCCGGTGACCGGCGAAAATCGCGCGGACGACGGACATTTGGAGAACATAACGGTAAAGAAGGAAGTTGTTGCCAATAGTCCCGAAGACGAGGATATCGATGTGGACGACAATGTCGATCAGAGCGACGATCGCGAGAACGAGAATCGCGAAGAACGAAATCTCGTGAATGCGAAGGAAGAACCTTTCGCGACACCGcggaatgacgaaaaaatcgaaactcaatCGAACGAACAatcggaacaaaaaaattacgaatga
- Protein Sequence
- MLFKGNSSRLELLIGKIQAHKESPSPPRDEKCVTIVKDVLGTGSSSWHSEDGVPNSRRGGETPSSCATPTSASFPSEPEVDTEIGINADGNNTAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKNQSPGQSAKLELDYGRRSVSSHSTSSPPIPNSPCPSFNLTLNLKNSFKSQQSSYMNSNGTPTTPILNSPLKLACMYCTRDSFTSMQQLQMHVNAMHQSILNGESLAMPSPGHNQQEANNSRSREPDKFDRSTRKDHETTYRLEDREKSTEREKGETIENSFSCGQCTMKFSNLSSLRDHLMTIHRNDGFGSTLMMCPLCGIPCASATTYAEHYVLQHCESRSRVSSSKDPFRRDWEEGKSNGAGHESIRAAAKSQNVIARSSEIGPSEPADLTKKQQSKSGEFGYSAGTLLCGQCGAALKDFESFREHLARHLQADQQSNEIVPRNSCPKCDAVFPEREEMLVHLTKHYLGQMTKEYACGACKKCYPHPDLLQRHLLDTHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSTCSASNNENSPGNTPGEGRCYFRSEAEMNNHVRTVHAPPTGVNESPLPRSRASTPGITPNNSRCVFCGICCNNDLELQLHLASHSTSLYRCPICREGFPVEFLLDRHISQAHRVSSERNDGRENGRTHRASRSHEETQAKPQKRGRSPASSNNNSLNQRDNNTKRPNYGPTSNGPNPMTSVQHPCELCERGEFASEAELQAHKKLVHTPVKMQSKSLSSLSMTCAYCGEVCRSRSELESHTRIQHASNEPGGRHKCNICDEVCPSGGILAEHKLQKHCKIQLSDCCIVCRGSLGSEAQFMEHLQKHSLEGADPQQRLDNAVGHLPVACVVCRQTLISDLECRLHARHHLRGTSGFQSSSSSPSPIQPKAQQQQQKQQQQTALSCCLCLREFSADDFVSLPSNPAVTGGQSLRVCKPCYVRHSQGLPILSSPYEHARPSKSEKIPWPTATKEQINWEGSSDPWDNERLYKAEKSSRNATGSKDSDDNRCEECGIKFEGSEEAENHRIKEHGGNCRNSNTYTCIQCQMSFSSEEKIQQHVRKDHLESPNKASIDALRCHLCHFDANSPLQLQGHLIEHTFAGCAGLTCYICQALFTTSIALQNHMLQQHGLGARPYDCSYCSLKFFFRIELDHHVVTAHRRKESSSPSVDVGHNINTEEWPVTGENRADDGHLENITVKKEVVANSPEDEDIDVDDNVDQSDDRENENREERNLVNAKEEPFATPRNDEKIETQSNEQSEQKNYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721499;
- 90% Identity
- iTF_00398334;
- 80% Identity
- -