Aarm003240.1
Basic Information
- Insect
- Amblyteles armatorius
- Gene Symbol
- bab1
- Assembly
- GCA_933228735.2
- Location
- OW121686.1:22011234-22016868[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-10 3.1e-07 30.0 0.0 2 35 21 55 20 61 0.91 2 3 1.6e-17 1.6e-14 53.3 0.0 1 43 163 206 163 208 0.95 3 3 3.3 3.3e+03 -2.1 1.4 6 15 282 291 280 294 0.88
Sequence Information
- Coding Sequence
- ATGACTCGATTTCTAGCCGACTATTCGACCCTGTTGAAGTTGAAGGCACCGACCTGGACGCGTCACGATCTCCAGGATGCGATAGAGGCGGTCGTCACCCAAAAAATGAGGTTCACCCAGGCCTCGACCAAGTACGGAATCCCGAAGGGTACCCTCTACGACAATATACTCGGCAAATCGAAGCGCATGATGGTCCTCGAGGAGGCCGGTCTTAACAGCAACGAGGAGACCGCCGTCCTCGAATTTTGCTGCGACATCACCGTCAGCCCCTACAacagaagaacgaaaaaatctcTGAACGCTATTCTTAATTTTGTCGAAAGACTGCGACGCCGAAGAGATCCGGGCTTCATATTCACCGGGCTTTCGGGCTTTCCAGACAGCTATCAGTATCAGCTACAGTCGCTCTGGCAAAAGTGCTGGAACACGAATTCGGGACTGGTGCACAATCTACGCTTCCGGGAACGCGGTCCGTTGAAATCATGGCGACCGGAAACGATGGCCGAAGCGATCTTCAGCGTTCTCAAGGAAGGGCTGTCTCTCAGTCAAGCTGCCAGaaaGTACGACATCCCTTATCCGACATTCGTGCTGTACGCGAATCGAGTGCACAACATGCTCGGGCCAAGCTCCGATGGCGGGGCCGATCTTCGGCCGAAGGGTCGCGGCAGACCACAGAGGATTCTCCTGGGAGTCTGGCCGGACGAGCATATTCGGGGTGTAATACGCGCCGTTGTTTTTCGCGACGGTCACATAGTCAAGGACGAGCAGACCCCGATCTATCCGAGCTTGGCGAATTACGCGTGCAACGGCCCGGAGGGTGCGGTGAGCCCTGGTgccgctgcggctgctgcGGTCGCCGCGGTCGCTCAAGgTCTTCGACATCAGATGTGCAGCATGGTAGCAGCAGCCCAGTCACACCAGCACGACATGATAGCGACGAACCTGTCGGCGAATTTCCAAGCCGCCGTACAAGTCAGTCAGCATCATTTGAACAACAACAGTCCCGcgagcaacaacaacaacaacaacaataacaataataggaATTCACCGTTGATACTCGGCCTGCCGAGTCCCGGATCCGGTGGTCCACCGGAGAGTCCCATGGAGGGCAGTCCGCTAGCGAGTCCACTCGCGCCTCTGATGGATCCTGCCCACATACCGAGCAGCGTCGAGGTCGGCATCGGCGTCAGCGGATTGACCTACAAGCCAACTCGCAGCTTCATCAGTCCGCGACCCGAAAATCTCTTCCAAGATGAAATCGCCGATCTCGTAAAGAGTCCTCACGGTCACAAGGACAAGGACAAAGTGCCGGTGAAACTCGAGCCACTGTCGGACTCGCGAAGCGAGCAGTAA
- Protein Sequence
- MTRFLADYSTLLKLKAPTWTRHDLQDAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLNSNEETAVLEFCCDITVSPYNRRTKKSLNAILNFVERLRRRRDPGFIFTGLSGFPDSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHIVKDEQTPIYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSPASNNNNNNNNNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGLTYKPTRSFISPRPENLFQDEIADLVKSPHGHKDKDKVPVKLEPLSDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721169;
- 90% Identity
- iTF_01497315;
- 80% Identity
- -