Basic Information

Insect: Euzophera pinguis
Gene Symbol: -
Assembly: GCA_947363495.1
Location: OX376162.1:5846914-5867269[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.7e-06 0.00044 21.1 1.9 1 23 421 443 421 443 0.97

2 20 0.0043 0.34 12.1 0.6 1 20 449 468 449 471 0.94

3 20 2.2e-05 0.0017 19.3 5.6 1 23 490 512 490 512 0.98

4 20 0.0001 0.0079 17.2 4.1 1 23 518 540 518 540 0.99

5 20 3.7e-05 0.0029 18.6 5.3 1 23 546 568 546 568 0.97

6 20 9.8e-06 0.00077 20.4 7.9 1 23 574 596 574 596 0.97

7 20 5.2e-07 4.1e-05 24.4 3.0 1 23 602 624 602 624 0.98

8 20 0.00011 0.0083 17.1 6.7 1 23 630 652 630 652 0.97

9 20 0.0001 0.0082 17.2 6.5 1 23 658 680 658 680 0.97

10 20 5.1e-07 4e-05 24.4 1.9 1 23 686 708 686 708 0.98

11 20 5.2e-05 0.004 18.1 7.9 1 23 714 736 714 736 0.98

12 20 5.9e-05 0.0046 17.9 7.8 1 23 742 764 742 764 0.97

13 20 1.7e-06 0.00013 22.8 5.4 1 23 770 792 770 792 0.98

14 20 3.5e-05 0.0027 18.7 6.1 1 23 798 820 798 820 0.97

15 20 2.4e-05 0.0019 19.2 7.3 1 23 826 848 826 848 0.97

16 20 3.2e-06 0.00025 21.9 6.0 1 23 854 876 854 876 0.98

17 20 3.8e-05 0.003 18.6 8.3 1 23 882 904 882 904 0.97

18 20 7.2e-06 0.00056 20.8 5.1 1 23 910 932 910 932 0.98

19 20 0.00056 0.044 14.9 0.3 1 23 939 961 939 961 0.96

20 20 0.29 23 6.3 4.2 1 23 972 994 972 994 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.7e-06	0.00044	21.1	1.9	1	23	421	443	421	443	0.97
2	20	0.0043	0.34	12.1	0.6	1	20	449	468	449	471	0.94
3	20	2.2e-05	0.0017	19.3	5.6	1	23	490	512	490	512	0.98
4	20	0.0001	0.0079	17.2	4.1	1	23	518	540	518	540	0.99
5	20	3.7e-05	0.0029	18.6	5.3	1	23	546	568	546	568	0.97
6	20	9.8e-06	0.00077	20.4	7.9	1	23	574	596	574	596	0.97
7	20	5.2e-07	4.1e-05	24.4	3.0	1	23	602	624	602	624	0.98
8	20	0.00011	0.0083	17.1	6.7	1	23	630	652	630	652	0.97
9	20	0.0001	0.0082	17.2	6.5	1	23	658	680	658	680	0.97
10	20	5.1e-07	4e-05	24.4	1.9	1	23	686	708	686	708	0.98
11	20	5.2e-05	0.004	18.1	7.9	1	23	714	736	714	736	0.98
12	20	5.9e-05	0.0046	17.9	7.8	1	23	742	764	742	764	0.97
13	20	1.7e-06	0.00013	22.8	5.4	1	23	770	792	770	792	0.98
14	20	3.5e-05	0.0027	18.7	6.1	1	23	798	820	798	820	0.97
15	20	2.4e-05	0.0019	19.2	7.3	1	23	826	848	826	848	0.97
16	20	3.2e-06	0.00025	21.9	6.0	1	23	854	876	854	876	0.98
17	20	3.8e-05	0.003	18.6	8.3	1	23	882	904	882	904	0.97
18	20	7.2e-06	0.00056	20.8	5.1	1	23	910	932	910	932	0.98
19	20	0.00056	0.044	14.9	0.3	1	23	939	961	939	961	0.96
20	20	0.29	23	6.3	4.2	1	23	972	994	972	994	0.98

Sequence Information

Coding Sequence: ATGAATCCCGAGCACCACAGCATCAATACGGGTGGTGGCCAGCCTCCTGGAAGTTCAGAGTCTCAGAACCAGAGGATTCAAAATGCCCAGCAACAGCAGGGCAATAACTTACCCGCTACTACTTCGGCGACGGACTTGCGTGTAAATTCCGTGAATTCGGCAGCCGTCAATGTTGCTTTGTCTAGCGTTGCAAAATACTGGGTGTTTACCAATCTGTTTCCTGGTCCCATACCGCAAGTTTCTGTATATGGACTTCCCACAGGCACAAGAATCGAGAATGGGAAACCTGTGCAGGATTTGGGCCAGACCCATGCAAGTATTCTCAATGGTGATCCTAACATCATACTTGGTCACCACACTGGGCAGCCGCAGGTCACAGTATCTGCCGCTGGTGCACAGCAAATACCGGTATCTCAGATCATAGCAGCACAAGCTGGACAGACACATGAAGCCTTGGTAGCCCACAGTCAACAAGAGTTGGCGGCTCAGCAGGCTTCAGGTGGTGCCCAAGTCACTACTACCCATCAGCAGGTACCCAATAGTCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGGCATCATTCACAACATTTGATGCAGCAGCAACTGATGGGAACTCGTCAGGAGCATACAAATCAGCAGATACAACTAACCGTCAGTGAAGATGGCATCGTCACAGTTGTGGAGCCCGGAGGTGGGAAACTTGTAGACAAGGAGGAGCTCCATGAAGCTATCAAGATGCCAACGGATCACCAGACACTTACTGTTCATCAATTACAGCAAATTGTTGGACAGCAGGTAATAGACAGTGTAGTTCGCATTGAGCAAGCTACAGGCGAGCCGGCCAATATTCTGGTGACGCACAATCCGGACGGCACTACGTCTATTGAAGCGAGCGCTGCGGATCCTCTCATAGTCAAAGATGAGAAAAACTCTGGCAAGATTGAAACAGCACAGTTCGCTATACCGGCCGAGATAAAGGATATCAAGGGGATCGATTTGAAGAGCGTCGGCACAATGGGTATGGAAGGAGCCGTCGTAAAAATATCAGCCGGAGCTGCGGACCACGATCTGCATGCTATGTACAAGGTGAATGTGGAGGATCTGTCGCAGCTGCTTGCTTATCACGAGGTGTTTGGGAAGCTAAATAACGAGGGACAGCCACAAGCTAAGGTGATAAGTGAAGTGGAAGTAGAGGCAGGCACGAGCACCATGTCGGAGTCAGAATCTTCGCCCGGACAGCATTCGTGCGATATTTGTGGGAAGAGCTTCCCATTCCGATACCAACTCATTGTTCATAGACGATATCACGGCGAGAGCAAGCCGTTTACTTGCCAAGTATGCGGTTCCGCCTTCGCTAACCCCGTCGAGTTATCAAGACACGGAAAATGTCATCTTGCCGGCGACCCAACGGAACGCAACGCCAAGCGGTTGGCTCAAGACAAACCCTACGCTTGCACCACTTGCCATAAAACATTCTCCCGTAAGGAGCATCTCGATAACCATGTCCGGAGCCACACTGGAGAGACGCCTTACAGATGCGAGTTCTGCGCAAAGACGTTCACACGTAAGGAGCACATGGTGAACCACGTGCGGAAACACACGGGCGAGACTCCGCACCGCTGCGAAATCTGCAAGAAAAGCTTCACCAGGAAAGAGCACTTTATGAACCACGTCATGTGGCACACAGGTGAAACGCCGCACCATTGTCAAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAATGAACCATATGCGATCGCACACAAACGATACTCCCTTCCGATGCGAACTATGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATTATGTGGCACACGGGCGAGACACCCCATCGCTGCGACTTCTGTTCCAAAACGTTCACCCGTAAAGAGCACCTTTTGAACCACGTGCGTCAACACACGGGCGAATCGCCTCACCGATGCAATTTCTGTTCGAAATCGTTCACGCGACGGGAACATTTGGTGAACCACGTGAGACAACATACCGGAGAGACACCGTTTCAGTGCGGATACTGCCCTAAAGCATTCACTAGGAAAGACCATCTCGTCAACCACGTAAGGCAACACACTGGGGAGTCCCCACACAAATGTTCCTTCTGTACCAAGTCATTTACTCGCAAGGAACATCTCACAAATCACGTTCGCCAACACACAGGAGAATCACCTCACCGATGTACCTTCTGCTCAAAGTCATTCACGAGGAAAGAACATCTTACTAACCACGTCAGACAGCACACAGGCGAAACCCCACACAAGTGCACGTACTGCCCGCGCGCGTTCACTCGCAAGGAGCACCTCAACAACCACATCCGGCAGCACACCGGCGACATGCCGCACTCGTGCTCCTTCTGCAGCAAGAGCTTCTCCAGGAAGGAGCATCTCGTCAATCACATCAGACAACACACGGGCGAGACGCCGTTCAAGTGCACGTACTGCACGAAGTCATTCTCGCGCAAGGAGCACCTCACGAACCACGTGCATCTGCACACCGGTGAAACTCCCCACAAGTGCCCGTTCTGCACGAAGACATTCTCAAGAAAGGAGCATTTGACCAATCACGTCAGGATCCACACGGGCGAATCGCCACATCGCTGCGAATTCTGCCAAAAGAGGTTCACTCGTAAAGAGCACCTCACGAACCACATGAAGCAGCACACTGGCGACACTCCACACACTTGCAAGATTTGCTCCAAACCATTCACCAGGAAGGAGCATTTGGGGACGCACATGAGATCGCACAGTTGCGCCGAACGTCCCTACAGTTGCGGCGAATGCGGCAAATCGTTCCCGCTCAAAGGGAACCTGCTTTTCCACGAACGATCGCACAACAAGAACAACAGCGGCAATGCCAGGCCGTTCCGGTGCGATGTCTGTTCCAAGGACTTCCTTTGCAAAGGTCACCTGGTGGCGCACCGTCGCACGCACGACTCGACGTCGCCGGCGGCGCAAGAGGAAGACTGCGAAAAGCAGGAGCCCGTCGACAGGAAACATGATATCTTGGTTACGACAGAGACTCGGCCAGCGGAAACTACTAATGTCGTTCAAAACGCTCAAAACAATTCAACTAATGTGATGCAAATAACAAATCAGCAACAAGTCCGAACGGTGCCGACGAGCGCGGCGGACGTGCAGACCGCCACCTTCCAGCATCAGACCAGCTCCGGCACGCTGCATCACCCCGTCACCGTTAACTACTAG
Protein Sequence: MNPEHHSINTGGGQPPGSSESQNQRIQNAQQQQGNNLPATTSATDLRVNSVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQTHASILNGDPNIILGHHTGQPQVTVSAAGAQQIPVSQIIAAQAGQTHEALVAHSQQELAAQQASGGAQVTTTHQQVPNSRVEFVQHHNIDMVNHVGHHSQHLMQQQLMGTRQEHTNQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHQTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKNSGKIETAQFAIPAEIKDIKGIDLKSVGTMGMEGAVVKISAGAADHDLHAMYKVNVEDLSQLLAYHEVFGKLNNEGQPQAKVISEVEVEAGTSTMSESESSPGQHSCDICGKSFPFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPTERNAKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHTNDTPFRCELCGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCSKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFTRKEHLNNHIRQHTGDMPHSCSFCSKSFSRKEHLVNHIRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKRFTRKEHLTNHMKQHTGDTPHTCKICSKPFTRKEHLGTHMRSHSCAERPYSCGECGKSFPLKGNLLFHERSHNKNNSGNARPFRCDVCSKDFLCKGHLVAHRRTHDSTSPAAQEEDCEKQEPVDRKHDILVTTETRPAETTNVVQNAQNNSTNVMQITNQQQVRTVPTSAADVQTATFQHQTSSGTLHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01071806;
90% Identity: iTF_00073027;
80% Identity: -