Elap022300.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010000317.1:52929-57033[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.4e-115 2.3e-110 369.4 33.1 1 300 29 331 29 331 0.98 2 3 0.0033 1e+02 2.8 2.8 121 171 330 380 328 384 0.91 3 3 0.036 1.1e+03 -0.6 5.2 194 238 362 405 349 406 0.59
Sequence Information
- Coding Sequence
- ATGGAGTCGCTGGTGGCAGGACGGAGACGAACTGCCACAAGGCATTCCGCCGAGGATCAGGCTCTTGATCAAATTGCAAAAGAGGCGGAAGCTAGATTAGCCGCTCGAAGACAAGCCCGAGCAGAGGCGAGGGAAATACGAATGAGGGAATTGGAGAGACAGCAGAAAGAAGCTGAAGAAAACGCTGACAGAGTTTATGATATGTGTACCGACTCAATTTCAGCTGACGCAAACAGAACCATGAGGGTGACACCGGACCCTGTGAGAACGTCTCGGCTTCTTACAAATTCAAATAACTTTCAATCCAGTCGGAGATCGTCGGAGGATTCGTTGGAAGATGCTGGCCTCAGTAGAGATCTAAGGTTAGAACTTAAGGAATTTGAAGAAAAATTCCGCAAAGCTATGATAACTAACGCGCAATTGGATAATGAGAAGTCAACTTATTCGTATCAAGTAGATCTATTGAAAGACAAACTGGAAGAATTGGAGGAAACAACGGCTCAGTTGCGAAGAGAGCTTAGAGAAAAAAATCGAGAAGCTGAACAGCTCAAACGAGTGAGTCAACGGCTTAAAGAAGACCTCGAGGTCAGCAGGGTTCAGCTCGTCGAACGAGACACGCTAATACAGGAGAATGGTCTCGTCATAGTCGAGGACGAGGGCGACGAGAACGATCCGGATATTGCAGAAAACGGTCCCCGTCCAAGAAAGAGAGTCCTAGTCAGTACGGAAGGCGCAGACTTGCTGCAAAATGCTGGTGAAGGCTCCTTAGATGTCCGGCTCAGAAGGTTTGCGTCCGAGAAGAAAGAACTGCAGGACGAAATTCGGCATTTGAGGCTCGAACTGGAGGACGCGAAGAATCGCGTGAGATCCGACAGGCTCCCAGGCTCGACGTTAGGAAACTTGTCAGACTCTGAGGATATTCAGCGCGAGGCGAACAAGCATTTATCAGATTATAAATTCAAGTTGCAAAAAGCAGAACAGGACATGTCGACGCTTCAGGCGACGGTGGCGAGGCTCGAGAGTCAAGTTATTCGGTATAAATCTGCGGCAGAGGCTTCTGAGAAGGCGGAAGACGAGCTTAAGGTCGAGAAGCGGAAGCTACAGCGAGAGGTACGAGAATCACAGGGTCGAGTGGAAGAACTTGAAACAGCGAATTCCCACTTACAACGAAGGCTAGATAAACTTAAAAACGCCAAGTCTGCACTTCTCAAAGAACTTTGA
- Protein Sequence
- MESLVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTDSISADANRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMITNAQLDNEKSTYSYQVDLLKDKLEELEETTAQLRRELREKNREAEQLKRVSQRLKEDLEVSRVQLVERDTLIQENGLVIVEDEGDENDPDIAENGPRPRKRVLVSTEGADLLQNAGEGSLDVRLRRFASEKKELQDEIRHLRLELEDAKNRVRSDRLPGSTLGNLSDSEDIQREANKHLSDYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00159106;
- 80% Identity
- -