Eruf027356.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- sip1
- Assembly
- GCA_963920795.1
- Location
- OY987207.1:39329293-39332744[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-94 1.2e-89 301.7 14.6 2 275 397 662 396 662 0.98 2 2 0.24 5e+03 -2.0 0.0 244 269 676 701 666 707 0.66
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAAAGATTTGAAATAACAGATTACGATttggaaaatgaatttaatccCAATCGTCCGCGGAGGCGGCAAACGAAGCACCAACAGATTTATGGTATTTGGGCTGATGATAGTGAAAATGAGGAGGAACAGGAACTAACATCGCGAAGAAGAGGTGGCAGGAAGGCCAAGGACTATTCGGCTCCAGTTAGTTTTGTCGCAGGAGGAATCCAACAGTCTGGCAAAAAGGACGATGACGAGGACGATGATATTGAAAATGATGAATCACAAATTACTGATGAAGAGGACGAACGGCCTACCTTCGGTCGGAAAAAAGTCGAAAGAGCTTCATCATCAGAATCTGAATCAGAACCAGAAGTTCGTCCACAGCCTCCAATAAGGAATCCTGGATTTGGAAGTGGTCCTAGTCGACCATCCTCCACGAATGCCCGTCTTGGAAAATGGGAAACCTATACAAAAGGAATTGGGGCAAAACTTTTGCTTCAGATGGGCTATAAGCCGGGAAAGGGTTTGGGTAAAGATCTGCAAGGTATCGCTCAACCTGTGGAAGCTCATATGAGAAAGGGTCGGGGAGCTATTGGCGCATATGGCCCTGAAAAAGCTGCTACTATAGCCAATCAAAagttgcaattaaaaattgacgAGGATGAGAGGGAAGCGAAGGAGTTCAAGGATAAAATTAACATGTGGAAAAAAGATGGGAAACCGGAAAAGGGTAAGAAAAATCGCTATTATTACAGGAGTGTGGAGGAAGTTATCGAGAAAGGGAAAAAGTCAAGTTTCTTGACTGATAAATACAGCAATAAACTCAGCAATGTTACGGTCATAGACATGACAGGCCCCGAAAAGAGGGTACTAAGTGGTTACCATGCTTTGGGACAGGCGAAAATTCTAGACGAGGAGCTCTACGAGCACAGACAGGCTAAAAAATGTACTAATTTCGTCCTTCCTGAACTTATgcacaatttgaatttaatcgTGGATATGTGCGAACAAGAAATCATCTCAATTGACAAAGCAGAACGGGAAGCTAATGAAAAGCAAAAGCAACTTGAGCATGAAAAGATAAATCTTGAGAAGATTGTTAAACTTGAAAACGATCATATAGACACTCTAGAACAGGCTCTAGATTTAGTTGAAAATCTAACGAACCCTGAAGATCCTCTTACGCTTTCTAAGgcggaaaaaatatttgttaaattgcAAACAGATTTTGCTGCAGAATATAAGGAATTTGGGTTGGGGGATTTGGCGGCTGGGGTAATAGCACCGCTGGTTAACCAGGAATTAAGCAACTGGAAACCATTAGAAGAACCTACTAAATACGTAGAAGTTGTAAAGAAATGGCGAACTATTTTAGGAATGCATCAGTCGGAAACAAGAAATGTTTTCGACCCGTACTCCTCTTTAGTCTGGGCTGGAGTTATTCCTAGTTTCCGCCAGGCAGCCTCTACCTGGAATCCTAAACAGCATCAGTCAATGGCTGCTTTGCTGGAGGCCTGGGCACCTCTTTTTCCAACTTGGATTCTTGATAATATTTTGGAACAAGTTATTTTACCTAGGCTCTCATCAGCCGTTCAAGATTGGGATCCACTTACAGATACTGTTCCAATTCATGTCTGGATTTTACCTTGGAGCGCTATTTTGGGTCATAAAATGGAGGAATTCGTGTATCCCATGATTCGCGATAAGTTGGGTAATGCGCTGCAGGCATGGGTTCCACAGGACAGATCAGCTAGACTTATGCTCACCCCTTGGAAATGCGCCTTTTCTGAAGGTGAAATGCAGAGTTTCTTGATGAAGCACATTATCCCTAAACTTCAAATGACTCttgctgaaataattataaatcctCTTCAACAAGATCTAGagctCTGGAATCAAGTTTCGGAATGGCATGAACTAATTTCTCCCCTATTTATGGCACAACTCCTCGACAAATACTTCTTCCCGAAGTGGATGCAAACTCTGGTCATTTGGTTAAACCAGCAGCCCAACCTCGAACAAATCTCGCGGTGGTACACCGGATGGAAGGGACTAATTACAGATGAGGTTATACAACAACCTAATATTAAGGAGCATTTTCGAAGAGCCTTGGAGCTCATGCATCGGGCGGTGTCCACTCCTCAAACTGCCGAAGCTCCTCCAGtacaacagcagcaacaacagccTCAGCCACAACCACAAGTCCAGACACAACCACAGCAAGTTTCTCATCCACCTGCTCTGATGGATCTCCAAATTCCACCTCCACCTCAGATAGAATTCAAGGAGTTGGTCTCACAGAGATGTGCCGAACGAGGGATTATTTTTGCTCCACTACCTGGACGAAGAGAATTCGGGAAGCAGGTGTACAGGGTgggtaaattattttgctacATCGATCGAGCTGTGCTTATGGTCAGCGATGGAAGTTTCTCAAATTGGACGCCGACTTCTTTGGGATTGCTTTTAGAGAGGGCTTCGTAG
- Protein Sequence
- MSDNEYERFEITDYDLENEFNPNRPRRRQTKHQQIYGIWADDSENEEEQELTSRRRGGRKAKDYSAPVSFVAGGIQQSGKKDDDEDDDIENDESQITDEEDERPTFGRKKVERASSSESESEPEVRPQPPIRNPGFGSGPSRPSSTNARLGKWETYTKGIGAKLLLQMGYKPGKGLGKDLQGIAQPVEAHMRKGRGAIGAYGPEKAATIANQKLQLKIDEDEREAKEFKDKINMWKKDGKPEKGKKNRYYYRSVEEVIEKGKKSSFLTDKYSNKLSNVTVIDMTGPEKRVLSGYHALGQAKILDEELYEHRQAKKCTNFVLPELMHNLNLIVDMCEQEIISIDKAEREANEKQKQLEHEKINLEKIVKLENDHIDTLEQALDLVENLTNPEDPLTLSKAEKIFVKLQTDFAAEYKEFGLGDLAAGVIAPLVNQELSNWKPLEEPTKYVEVVKKWRTILGMHQSETRNVFDPYSSLVWAGVIPSFRQAASTWNPKQHQSMAALLEAWAPLFPTWILDNILEQVILPRLSSAVQDWDPLTDTVPIHVWILPWSAILGHKMEEFVYPMIRDKLGNALQAWVPQDRSARLMLTPWKCAFSEGEMQSFLMKHIIPKLQMTLAEIIINPLQQDLELWNQVSEWHELISPLFMAQLLDKYFFPKWMQTLVIWLNQQPNLEQISRWYTGWKGLITDEVIQQPNIKEHFRRALELMHRAVSTPQTAEAPPVQQQQQQPQPQPQVQTQPQQVSHPPALMDLQIPPPPQIEFKELVSQRCAERGIIFAPLPGRREFGKQVYRVGKLFCYIDRAVLMVSDGSFSNWTPTSLGLLLERAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01256405;
- 90% Identity
- iTF_00628364;
- 80% Identity
- -