Ecal004632.1
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- retn
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010000021.1:9102305-9105530[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-17 2e-13 51.6 0.1 29 89 4 62 1 62 0.93 2 3 1.7 7.2e+03 -1.5 0.0 30 51 126 146 109 164 0.76 3 3 7.3 3.1e+04 -3.5 0.0 26 39 235 248 214 257 0.63
Sequence Information
- Coding Sequence
- ATGGCCAAGTCAGTGCTCGACCTCTACGAGCTGTACAACCTGGTGATCGCCCGAGGAGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTCCACCTCCCGTCGAGCATAACGTCGGCTGCGTTCACACTGCGCACTCAGTACATGAAATACCTGTACCCGTACGAGTGCGAGAAGAAGCAGCTGTCGACGCCGGCGGAACTGCAGGCAGCGATCGACGGCAACCGGCGGGAGGGCCGGCGCAGCAACTACGGCGCGTacggaggcggcggcggcagctcCGCCGCCGACAGCCTCGTCCACCAGCGCAGTCCCCACAGCCAGAGCAGCCTGGCTTCGCTTCACAGTCAGCTCACCCCCATATCGCTGGTGACGGCGGTGCAGGCGGTCGCGGCGGGCGGCCAGCACCAGGTGCCCAACCCCCAGAGCCTCGTCAACGGCAGCGCGGCGCACACGCCGCTGCCGCAGCACCCGCACCACCCCCACCTGCAGGCGAGCTTCGGAGGCACCCCCAGCGCAGGAGGCATAGCTCCGGAGTTCGAGGTGCGCATGGCGGCCGAGTACTTGAAGCAGTGGCAGCGCGACTTGGGCAGACGCGCGGCCGGCTCCCCGACGAACCTGATGAACCACCGGCAGGGCAGCGACTCGCCACCCCCGCGCACGCCGTCGAGCGACGCCGCCCTTTTCGAGATGTCCAGACTGACCCTTTGGAACATGTACAACAACAACATGCACCCAGGCCTCGGCTACCCTCAGGCGGTGTCGCCTCAGCCGAGCTCGCACTCGCCCCAGGGCCACCCCGCCAGTCCCGAGCCGCAGAAGGAGGCTCTCGATCTCGGCTTGAGATCCTCGCCGAGCTCCTCGTCGCCGGCGCGGCAGAGCCCCATCTCGTCCGCCGCCAGCATGCCCATAAAGCGCGAGCTGGAGCACAACACGTCCACGGGGGCAGCGACGAACAAGAGGCTATGCATGGACGAGGACAGTCCCGCGGAGAACAACATCTCCGCGTTGCCCGGCACGCACATCAAGATCTCAAACCGAGGGGATGGTCGCGACAACTCGTTGGTCGTCAGCATGGAACTGAACGGAGTCATGTACCAGGGTGTGCTATTCGCGCAGACCGATGGCAGGGCCAGCTTGGCCGCCTCGACCAACAACAACGAGACCAAGGCTTCTAGTCGCAACGTCGTCTCGTGA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKQLSTPAELQAAIDGNRREGRRSNYGAYGGGGGSSAADSLVHQRSPHSQSSLASLHSQLTPISLVTAVQAVAAGGQHQVPNPQSLVNGSAAHTPLPQHPHHPHLQASFGGTPSAGGIAPEFEVRMAAEYLKQWQRDLGRRAAGSPTNLMNHRQGSDSPPPRTPSSDAALFEMSRLTLWNMYNNNMHPGLGYPQAVSPQPSSHSPQGHPASPEPQKEALDLGLRSSPSSSSPARQSPISSAASMPIKRELEHNTSTGAATNKRLCMDEDSPAENNISALPGTHIKISNRGDGRDNSLVVSMELNGVMYQGVLFAQTDGRASLAASTNNNETKASSRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00079598;
- 90% Identity
- iTF_00713489; iTF_01381113; iTF_00712639;
- 80% Identity
- -