Ebru027236.1
Basic Information
- Insect
- Eurytoma brunniventris
- Gene Symbol
- retn
- Assembly
- GCA_900475205.1
- Location
- UXGB01000252.1:38717-43120[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-20 3.3e-16 60.2 0.0 14 89 2 75 1 75 0.93 2 2 0.91 4.5e+03 -1.2 0.0 29 51 135 159 120 176 0.78
Sequence Information
- Coding Sequence
- ATGCAGCCTGCCcGCACGCCGATCAACCGACTACCGATCATGGCCAAGTCAGTGCTCGACCTCTACGAGCTGTACAACCTGGTGATCGCCCGAGGAGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTTCACCTCCCGTCGAGCATAACGTCGGCGGCGTTCACACTGCGCACTCAATACATGAAGTACCTGTACCCGTACGAGTGCGAGAAGAAGCAGCTGTCAACGCCGGCGGAACTGCAGGCAGCGATCGACGGCAACCGGCGGGAGGGCCGGCGCAGCAACTACGGCGCGTACggaggcgggggcggcggcgccgccggcgacAGCCTCGTCCACCAGCGCAGTCCCCACAGCCAGAGCAGCCTGGCCTCGCTGCACAGCCAGATCAACCCCATATCGCTGGTGACGGCGGTgcaggcggccgccgcgggcgGCCAGCACCAGGTGCCCAACCCCCAGGGCCTCGTCAACGGCAGCGCGGCGCACACGCCCCTGCCGCAGCACCCGCACCACCCCCACCTGCAGGCCAGCTTCGGAGGCACCCCCAGCGCAGGAGGCATAGCTCCGGAGTTCGAGGTGCGCATGGCGGCCGAGTACTTGAAGCAGTGGCAGCGCGACTTGGGCAGACGCGCGGCGGGCTCCCCGACGAGCCTGATGAACCACCGGCAGGGGAGCGActcgccgcccccgcgctCGCCGTCGCGCGAGGCCGCCCTCTTCGAGATGTCCAGACTGACCCTGTGGAACATGTACAACAACAACCTGCACCCAGGCATCGGCTACCCCCAGGCGGTGTCGCCCCAGCCGAGCTCGCACTCGCCGCCGGGCCAGCCCGCCAGTCCCGAGCCGCAGAAGGAGGCGCTCGATCTCGGCTTGAGATCCTCGCCGAGCTCCTCGTCGCCCGCGCGGCACAGCCCCATCTCTTCGGCCGCCAGCTTGCCCATAAAGCGCGAGCTCGAGCACAGCGCGTCCTCGGGAGCAGCGGCGAATAAGAGGCTGTGCATGGACGAGGACAGTCCCGCGGAGAACAACATCTCCGCGTTGCCCGGCACGCACATCAAGATCTCAAACCGAGGGGATGGCCGCGACAACTCGCTGGTCGTCAGCATGGAGCTGAACGGAGTCATGTACCAGGGTGTGCTGTTCGCGCAGACCGACGGCAGGGCCAGCTTGGCTGCCTCGACCAACAACAACGAGACCAAGGCTTCTAGTCGCAACGTCGTCTCGTGA
- Protein Sequence
- MQPARTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKQLSTPAELQAAIDGNRREGRRSNYGAYGGGGGGAAGDSLVHQRSPHSQSSLASLHSQINPISLVTAVQAAAAGGQHQVPNPQGLVNGSAAHTPLPQHPHHPHLQASFGGTPSAGGIAPEFEVRMAAEYLKQWQRDLGRRAAGSPTSLMNHRQGSDSPPPRSPSREAALFEMSRLTLWNMYNNNLHPGIGYPQAVSPQPSSHSPPGQPASPEPQKEALDLGLRSSPSSSSPARHSPISSAASLPIKRELEHSASSGAAANKRLCMDEDSPAENNISALPGTHIKISNRGDGRDNSLVVSMELNGVMYQGVLFAQTDGRASLAASTNNNETKASSRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00079598;
- 90% Identity
- iTF_00714165;
- 80% Identity
- -