Ebru019495.1
Basic Information
- Insect
- Eurytoma brunniventris
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_900475205.1
- Location
- UXGB01003316.1:9750-14321[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-112 5.9e-108 361.4 35.7 1 300 29 323 29 323 0.95 2 3 0.0037 1.1e+02 2.6 2.5 122 171 323 372 321 375 0.91 3 3 0.035 1e+03 -0.6 5.2 194 238 354 397 341 398 0.59
Sequence Information
- Coding Sequence
- ATGGAGACGTCAGTAGCAGGCAGAAGGCGAACTGCCACAAGGCATTCAGCAGAAGATCAAGCATTAGATCAAATTGCCAAAGAGGCGGAGGCAAGATTAGCAGCAAGAAGGCAGGCTAGAGCAGAAGCTCGAGAAATCCGAATGAGGGAACTAGAAAGACAGCAAAAAGAAGCTGAGGAAAACGCAGATAGAGTCTTCGATATGTGTACGGcAGATGCAAATAGAGCTATGCGGGTCACACCTGATCCTATTCGTGCTTCCCGACTTCTTGCAAACACCAACAATTTCCAGTCCAGCCGAAGATCTTCTGAAGATTCTTTGGAAGATGCTGGTCTTGGCAGAGATCTCAGACTGGAACTTAAGGAATTTGAAGAAAAGTTCAGGAAAGCAATGATAGCTAATGCTCAGTTGGATAATGAAAAGTCTTCCTATGCATATCaagttgatttattaaaagataaactAGAAGAACTAGAAGAAATGACAGCACAATTACGACGAGAACTCAGGGAAAAGAATAGAGAGGCAGATCAATCTAAACGACTTGGTCAAAGATTACAAGAAGATTTAGATTCATGTAGAGCTCAACTTACAGAAAGAGATACACTAATTCAAGAAAATGGTTTAGTTATAGTCGAAGATGAAGGAAGTGAAGGTGAAGaaacgcaaaaagaaaatggacCTGTCAGTCGAAAGAGAGTTCTAGTTAGCACAGAAGCAGCAGAGCTATTACAAAATGCTGGAGAAGGATCATTAgATGTTCGACTGAGGAAGTTTGCTTCAGATAAGAAAGAATTACAAGATGAAATCAGACATCTGAGGTTAGAACTAGAAGAAGCGAGAAATCGAATGAGGCCAGAAAGATGTTCAGGATCATTATTagATTCGGAAGATGCTCAGAGAGAAGCTAACAAACTTTTGGCTGACTACAAATTCAAGTTGCAAAAGGCAGAACAAGACATGTCTACTCTTCAAGCAACTGTGGCTAGGCTAGAGAGTCAAGTAATTCGTTACAAGTCGGCTGCAGAAGCCTCTGAAAAAGCAGAAGACGAATTAAAagttgagaaaagaaaattacaaagagaggtCAGAGAATCACAGGGTCGAGTCGAGGAGTTGGAAACGGCTAACTCTCACTTGCAGCGACGCCTCGATAAACTGAAAAATGCTAAATCAGCCCTGCTGAAGGAACTCTGA
- Protein Sequence
- METSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVFDMCTADANRAMRVTPDPIRASRLLANTNNFQSSRRSSEDSLEDAGLGRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEEMTAQLRRELREKNREADQSKRLGQRLQEDLDSCRAQLTERDTLIQENGLVIVEDEGSEGEETQKENGPVSRKRVLVSTEAAELLQNAGEGSLDVRLRKFASDKKELQDEIRHLRLELEEARNRMRPERCSGSLLDSEDAQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01428278;
- 80% Identity
- -