Eadl002156.1
Basic Information
- Insect
- Eurytoma adleriae
- Gene Symbol
- -
- Assembly
- GCA_900480045.1
- Location
- UXGC01000984.1:3424-4419[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-09 3.8e-06 27.2 0.0 2 42 16 56 15 59 0.87 2 2 8.4e-11 1.1e-07 32.2 0.0 1 42 167 208 167 211 0.92
Sequence Information
- Coding Sequence
- ATGTCAAAGAATTACGTGAGAAAAACAGACCGAGGTCAATGGTCgcaagaaaatttaactttagctATAAAGGCTGTGAAAGAAGgtttgtgtaataaaaaatctgctAGTACAAAATATGGGATACCTCGAACAACTTTGGCACGTCATTTAAAATTGGGTATTGATGAGAAGAAGCGACAAGGGAGAATTCCAATTTTAAGCAAGTGTGAAAAAGAATTGGAAGAATTTCTTCTAAACTTACAAAGTCAAGGAATAATATGGACTTCAGCTGAATTAcagagattaatttttcaatttgtacaACAGCATAATGTGAAATTTGGTCGTCATAATGTGAAAAAGTTACTTAGTAACAAGTGGATCAACACATTTATCTGTAACCatccaaatttaaatatagaaaaaagtaacaaaggtataattgttgaaaatgaaataaagtcCAAAGTAAAACGTGATCTATATCATGTACAAAATGCAGATCGATGCCAATGGACTGAGAAGCAATTAATTCAAGCTATCGATTCTGTAAATAGTGGTGCTTGTAGTTACAGAGCTGCAAGTAAAATGTTTGGAATACCTAGAACTACATTAATAAGGCACATTAAAGAAGgtaccaaagaaaaaaaacgtttagGTCGTATGCCAATTTTTGGAGAACTTGAAAAAGATTTGACAGAAATTCTGCTTAAAGAGCAAAGTTTAAGGAATAGTTTATCGATGACAGAACTCAGGAGAATAGCATTTAATTTTGCGGAAACTCATCATATTAAACATAAGTTTAACAAAAGTAAAGGTTTAGCAAGTTATGAGTGGGTTCACGCATTTACAAACAGACATCCTGAAATAACtgtgaaaaagaataattctTCATCCAAAGTTTACGAATTAAGTTACTCATATGAATATAGTGACatgttgcaaataattttagaagaaGGAGATGCATTTGATTTGAATAGTGTATATACGAGCGATAATTGTGAtccataa
- Protein Sequence
- MSKNYVRKTDRGQWSQENLTLAIKAVKEGLCNKKSASTKYGIPRTTLARHLKLGIDEKKRQGRIPILSKCEKELEEFLLNLQSQGIIWTSAELQRLIFQFVQQHNVKFGRHNVKKLLSNKWINTFICNHPNLNIEKSNKGIIVENEIKSKVKRDLYHVQNADRCQWTEKQLIQAIDSVNSGACSYRAASKMFGIPRTTLIRHIKEGTKEKKRLGRMPIFGELEKDLTEILLKEQSLRNSLSMTELRRIAFNFAETHHIKHKFNKSKGLASYEWVHAFTNRHPEITVKKNNSSSKVYELSYSYEYSDMLQIILEEGDAFDLNSVYTSDNCDP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01380519; iTF_01381237; iTF_00714289;
- 90% Identity
- iTF_00714289;
- 80% Identity
- -