Esim017581.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990113.1:5280265-5280879[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-10 1.3e-07 32.2 0.0 3 36 13 46 11 50 0.94
Sequence Information
- Coding Sequence
- ATGGAGCCACAAAAGCGGCGAAAAGTGTACAGTAAAACACAACTAGCCGAAGCAATCAAAGCAATTAATGACGGAACAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCTAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTAAATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACTTAAATCGTCCAAACCCTTTTAAAAATGGTATGCCTGGCAGATATTGgtttgagaattttataaatagacatcCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCAGCTATACGTGCATGGTTCGATAGagtgaacaattattttatgacaaataatcTGCATGATGTTTTAGAAGATCCTAGACGAGTGTTTAACTGTGACGAAACTGCTTTCTTTTTATACCCAAAAGAGAAAGAAGTTTTGGTTAGCAGAGGTAGCAAACGAGTGTATAATCGTGTTGCTAGTGCTTGA
- Protein Sequence
- MEPQKRRKVYSKTQLAEAIKAINDGTSVYEASKRFNIPKTTLRDKRDGKYKNEICGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNLNRPNPFKNGMPGRYWFENFINRHPTVSKRVAQNLPSSRNQVTEAAIRAWFDRVNNYFMTNNLHDVLEDPRRVFNCDETAFFLYPKEKEVLVSRGSKRVYNRVASA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00122303;
- 90% Identity
- iTF_00709131;
- 80% Identity
- -