Esim011142.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990109.1:7072138-7072761[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-11 2.9e-08 34.2 0.0 3 36 13 46 12 50 0.94 2 2 7 3e+03 -1.1 0.0 2 11 85 94 84 98 0.81
Sequence Information
- Coding Sequence
- ATGGAGCCACAAAAGCGGCGAAAAGGGTACTGTAAAACACAACTAGCCGAAGCAATCAAAGCAATTAATGACGGTACAAGTGTATATAAGGCATCAAAAAGGTTTAATATTCCTAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTTAATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAGCCTAGTCCAAAACTTAAATCGTCCAAACCCTTTTAAAAATGGTGTGCCTGGCATATATTGgtttgagaattttataaaGAGACATCCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCAGCTACACGTGCATGGTTCGATAAaatgaacaattattttatgacaaataatcTGTATGATGTTTTAGAAGATCCTAGACGAGTGTTTAACTGTGACGAAACTGCTTACTTTTCATGCCAAAAAGAGAAAGAAGTTTTGGTTAGCAGAGGTAGCAAACGAGTGTATAATCGTGTTGGTGTGAAAAAGAGTGCTTGA
- Protein Sequence
- MEPQKRRKGYCKTQLAEAIKAINDGTSVYKASKRFNIPKTTLRDKRDGKYKNEICGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVASLVQNLNRPNPFKNGVPGIYWFENFIKRHPTVSKRVAQNLPSSRNQVTEAATRAWFDKMNNYFMTNNLYDVLEDPRRVFNCDETAYFSCQKEKEVLVSRGSKRVYNRVGVKKSA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00122303;
- 90% Identity
- iTF_00122303; iTF_00761572; iTF_00761573; iTF_00709165; iTF_00709166; iTF_00709139; iTF_00709140; iTF_00709141; iTF_00709144;
- 80% Identity
- -