Ever003159.1
Basic Information
- Insect
- Eupristina verticillata
- Gene Symbol
- Lrrfip2
- Assembly
- None
- Location
- GWHALOE00000277:2870890-2874256[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-112 3.8e-108 360.7 36.4 1 300 29 323 29 323 0.94 2 3 0.0033 40 2.8 2.4 122 171 323 372 321 376 0.91 3 3 0.034 4.1e+02 -0.5 5.4 193 238 353 397 335 398 0.60
Sequence Information
- Coding Sequence
- ATGGAGACATCGGTGGCAGGAAGGAGAAGAACCGCCACTAGGCATTCAGCAGAAGATCAAGCTCTAGATCAAATCGCCAAAGAGGCAGAGGCAAGGTTAGCTGCAAGAAGACAAGCTAGAGCAGAGGCACGTGAAATTCGAATGAGAGAATTAGAAAGACAGCAAAAGGAAGCTGAAGAGAATGCAGATAGAGTTTTTGATATGTGTACAGCTGATACCAACAGAGCTATGAGGGTAACACCAGATCCTATTCGTGCTTCTCGCCTTCTTGCAAATACAAACAACTTTCAATCAAGTCGCAGATCTTCTGAAGATTCTTTGGAAGATGCTGGCCTTGGCAGAGATCTTCGAATAGAGCTAAAAGAGTTTGAAGAGAAATTCAGGAAAGCAATGATTGCAAATGCTCAATTAGATAATGAGAAGTCTTCCTATGGATACCAAGTTGATTTATTGAAAGATAAGCTAGAAGAACTGGAAGAAATGTCTGCTCAATTACGTCGTGAACTCAGGGAAAAAAATCGTGAAGCAGATCAATCTAAGCGTATTAGTCAAAGATTAAAAGAGGATTTAGATATATGCAGAGCACAACTTTTAGAAAGAGATACTCTAATACAGGAGAATGGATTGGTTATAGTTGAAGATGAAAATAGTGAGAATGAAGATTTACAAAAACAAAATGGACCTATTCATCGAAAGAGAGTGCTAGTCAGTACAGAAGCTGCAGAATTATTACAAAATGCTGGAGAAGGGTCTCTAGATGTTCGACTGAGAAAGTTTGCATCAGAGAAAAAAGAATTACAAGATGAGATCAGGCATCTCAGGTTAGAATTGGAAGAAGCTAGAAATCGAACAAGGCCAGAGCGATCTTCAGGTTCTGGATTAGATTCAGAAGATGCTCAAAGGGAAGCTAATAAACTTTTAGCAGATTACAAATTTAAGTTACAAAAAGCAGAACAAGATATGTCAACTCTTCAAGCAACTGTAGCTAGGCTAGAAAGTCAAGTAATTCGCTATAAATCTGCTGCTGAGGCTTCTGAAAAGGCTGAAGATGAATTGAAAGTTGAAAAGAGAAAATTGCAAAGAGAGGTCAGAGAATCACAGGGTCGAGTTGAAGAATTAGAAACAGCCAATTCACATTTGCAGCGACGTTTGGATAAACTGAAAAATGCTAAATCAGCTCTCTTAAAGGAACTTTGA
- Protein Sequence
- METSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVFDMCTADTNRAMRVTPDPIRASRLLANTNNFQSSRRSSEDSLEDAGLGRDLRIELKEFEEKFRKAMIANAQLDNEKSSYGYQVDLLKDKLEELEEMSAQLRRELREKNREADQSKRISQRLKEDLDICRAQLLERDTLIQENGLVIVEDENSENEDLQKQNGPIHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRTRPERSSGSGLDSEDAQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01428278;
- 80% Identity
- -