Basic Information

Insect: Euplagia quadripunctaria
Gene Symbol: salm
Assembly: GCA_963859945.1
Location: OY982563.1:11819321-11843673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.54 55 5.5 0.7 3 21 2 20 1 21 0.94

2 11 5.7e-06 0.00057 21.1 0.9 1 23 321 343 321 343 0.98

3 11 1.1e-05 0.0011 20.2 2.1 1 23 349 371 349 371 0.98

4 11 1.5 1.5e+02 4.1 3.0 5 23 668 686 665 686 0.92

5 11 1.2e-07 1.2e-05 26.4 1.2 1 23 692 714 692 714 0.97

6 11 0.00018 0.018 16.4 4.2 1 23 724 746 724 746 0.98

7 11 0.069 6.9 8.3 4.2 2 23 925 946 924 946 0.97

8 11 0.034 3.4 9.3 1.6 1 14 952 965 952 966 0.94

9 11 0.9 90 4.8 0.0 10 23 993 1006 991 1006 0.93

10 11 5.1e-06 0.00051 21.3 1.7 3 23 1083 1103 1081 1103 0.96

11 11 6.1e-07 6.1e-05 24.2 0.5 1 23 1109 1131 1109 1131 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.54	55	5.5	0.7	3	21	2	20	1	21	0.94
2	11	5.7e-06	0.00057	21.1	0.9	1	23	321	343	321	343	0.98
3	11	1.1e-05	0.0011	20.2	2.1	1	23	349	371	349	371	0.98
4	11	1.5	1.5e+02	4.1	3.0	5	23	668	686	665	686	0.92
5	11	1.2e-07	1.2e-05	26.4	1.2	1	23	692	714	692	714	0.97
6	11	0.00018	0.018	16.4	4.2	1	23	724	746	724	746	0.98
7	11	0.069	6.9	8.3	4.2	2	23	925	946	924	946	0.97
8	11	0.034	3.4	9.3	1.6	1	14	952	965	952	966	0.94
9	11	0.9	90	4.8	0.0	10	23	993	1006	991	1006	0.93
10	11	5.1e-06	0.00051	21.3	1.7	3	23	1083	1103	1081	1103	0.96
11	11	6.1e-07	6.1e-05	24.2	0.5	1	23	1109	1131	1109	1131	0.98

Sequence Information

Coding Sequence: ATGTGCCCGCGCTGTCAGGAACAGTTCGAGAACCTTCACGAGTTTCTATATCACAAACGACTGTGCGACGAAAAGGCATTGCAGATGGGCGAGGAAAGAATGCACTCCGATCCTGAAGAAATGGTCGTTTCAGGAGATGAAGAAATGGATGGGCCTAATAAACGACTAGAACAAGTCCGCCGGCATCGACAAGATGCAGAGAACAATAACAGCCTTGAAGATGGTGAGGCTGAAGGGCCTGAAGCCGATGTGCCACCAGTAGGACTCCCCTTCCCAGTGGCAGGCCACGTCACGCTGGAAGCTTTACAAAATACTAAAGTGGCAGTAGCTCAATTTGCCGCAACCACTATGGCGAACAACGCCGATAATGAAGCGGCGCTACATGAACTAGCCGTGTTACAAAGCACATTATTTACGCTACAACACCAACAAGTGTTTCAGCTGCAATTAATACGCCAATTACAAAATCAACTTTCATTAACACGACGGAAAGACGATCCGATCCAGAGCCCACCGCCGAGTGAACCAGAGCCAAGTTTGCCAGCGCCTCCCGTTCGATCACCGTCGCCGCCTCGTCCGCCACGGGAGCCAACTCCTGTCGCACCTACCCCTCCCACTAGTCAAAACTTGCCGTCAACCCACTCGCATCTCACACCTAAGACGGAACCACTTTCCGTTCCCAAACTTCCAACCTCGTCTCCACCGATAATGAGTCATCCACCTTACAGCTCTATTTCCTCGTCGTTAGCGTCTTCAATAATTACAAACAACGACCCACCACCGTCTCTCAATGAACCAAATACGCTAGAAATGCTACAGAAAAGAGCTCAAGAAGTATTAGACAACGCGTCACAAGGGCTATTAGCGAACAATCTTGCCGATGAACTCGCCTTTCGAAAATCTGGCAAAATGTCACCTTACGATGGAAAATCTGGAGGAAGAAACGAACCATTTTTCAAGCATCGCTGCCGTTACTGTGGAAAAGTATTCGGAAGTGACTCAGCACTGCAAATCCACATTCGATCCCACACAGGTGAAAGAccttttaaatgtaatgtatgtgGATCACGATTTACAACCAAAGGAAATCTAAAAGTACATTTCCAAAGACATACATCAAAGTTTCCGCATGTTAAGATGAATCCCAATCCAGTACCAGAACATTTGGATAAATACCATCCCCCACTGTTAGCGCAATTGTCGCCGGGACCGATTCCTGGCATGCCACCACATCCACTTCAATTCCCTCCGGGTGCGCCAGCTCCTTTTCCGCCAAGCTTGCCGTTGTACAGACCCACACACCATGATATTTTACCACCTCGTCCGCTTGGCGATAAACCTCTACCACCTCATCCATTATTTGTGATGCGAGAGGAACAAGAAGCTCCGGCTGATCTCAGTAAACCATCCGCGCCGAGCCCCTGCCAATCAGGACCAGAGGTTAAGTCTGAACCACAAGACGAGGAAAGTCAACGGGATTCCAGTTTTGAAGACACAGATCGTGTTTCTCCTAAACGAGAACTCGAAGAAAACGATACAGCACCAGATCCAGAACAAGACAGATATCCTTCAACATCTCCGTACGATGACAGCATGGATTCCAAATATAGCAATGAAGAACAAATTGGCAGAGAAAGTCCTCACGTGAAGCTCGATCCAGATCAACCGGAAAATCTCTCAAGTAAGAATTCACCGATATCCGGGCCAATTTCAATAGCAACGGGTCTACGTACTTTTCCTTCTTATCCCCTTTTTCCTCAGTCGCCGCCCAGTAGTATTTCTTCTGGTAGTTTAACTCCATTTCTAAACACAGTTCACAACGTTGTTGACGTAGACCTAGCGCGTGATTCTATGTTCTATAATTCAATATTACCACGTCCAGGCAGCAACGATAACTCCTGGGAAAGTTTAatagaaataacaaaaacaacagAAACATCTAAACTTCAACAGTTAGTCGATAATATCGATAACAAAGTATCAGACCCTAATGAATGTATAGTATGTCACCGGGTTCTCTCATGCAAAAGTGCCCTACAAATGCACTATCGTACGCACACGGGCGAGCGACCTTTCCGATGTAAATTGTGTGGTCGCTCTTTTACGACCAAAGGCAATTTGAAAACCCATATGGGCGTTCATCGCATTAAACCTCCCGTTCAAATGTTACACCAATGCCCAGTTTGCCATAAGAAATTTTCGGATCCCTCAATTTTACATCAACATATACGTCTTCACACAGGCGAGCGTGCCAGCATCCCTTTTGATCAAATGAGAAACCTTGATATTGACGGTTTTCCATCACTGAGTAATGGGTCAGACGTCAGCGACTATCAAGCTCAGCGCCTTTTCCCACCTCCAATGTTTCCCACTCCGAATACTCCCGGCGACCGACGGGCGGACTCCCACGGGACCGACGATGAGAGCGGCCGGGACGAGCGTGAGCCCGCTATTCGGGAGTTCGACGACGACTTAGATATGAAGGATCGTCGAACTTCGCCGCTCTCCGTCTGCGCCTCGGCGTCCGAAAGCGAATTAAAAACCATCACCACAACGGCTTCCCTCCCATCGGCGACAGGTTCGGAGAGCGGGCGGAGCGCGCGAGCTTCACCGCCATCACCCACGATGTCGACGCTGTCGACGCCGCCGAGGCTGCCGCTGCACTCACCGCTGCCATCGCCGCCTACGCCTATCGCCGCGCTCAGCGCTCTCGGAGGATCGCCCTTCAGCCCACTCGGACTCGCGTTCCCTCCCGCAGTGCGCGGCAACACGACCTGTAACCTCTGCTACAAGACGTTCGCCTGCCACTCTGCTCTGGAGATACATTACCGCAGTCACACCAAGGAGCGACCATTTAAGTGCACCGTATGTGATCGCGGCTTCTCCACAAAGAGCAGTGGCGGCGGTTGCCGGTGTGGTAGGCGCGCGCGCGCATCCCGCCCCCCGCACGCCACTGCTTTGGACCTCTGGAACGCCTTCGTTTACCCGGGCAACATGAAGCAACACATGCTGACACACAAGATCCGCGACGTACCTCCTGGCTTCGACAAGAGTCAAGAGGACCGCGAGTCGAGCCCGGACAGACGCTCATCTCCTGACAAAATGGACCTGAAACGATCGCCGCCCGCGCACCCTCCGCCTCAAATAACGCATGCCCCACCCATTGACATGCCACCGATGCCTAAGCGACCTACCGTACCGTCAGCACCAACACACCCACCACCACCTGTTTCATCGAAACATCTTTGCGGAGTTTGCCGCAAGAATTTTTCTTCGTCGTCAGCGTTGCAAATTCATATGCGCACGCACACAGGTGACAAGCCCTTCAGATGCGCCGTCTGCCAAAAAGCCTTCACTACAAAGGGTAACCTCAAGGTACACATGGGAACGCACATGTGGAGCGGAGGCGCATCGCGGCGTGGCCGTCGTATGTCCCTAGAGTTACCGCCGCGGCCACTCCACGAGCCCCATGAGCTATTGAGAAGGCCAGACCTATTCTATCCATACCTGCCCGCGCCTTTCCTCAACGGCATGCAGCAAAAGCTGAATGAAATATCAGTCATACAACAAAGCGCGGGCCAAAACGGAGTAGCCGGCAAGTTTCCAGGGCTCCTCGGATTTGGAGCGTTCGCAGGCGCGAGGCCCGGTGCAGCTTCACCTCTTGAGAGACCACCGTCACTGGAAGGTGGAGATGAGCGGCAGGCTGCTATGCGCGAGTTAGCTGAGCGTGGGCGTGAGTTTGCGGAGCGAAGTCGCCAAATGCGCGAGGAAGGCGAATACCGGTCGCCTCCGGCGCACGGGCACCCACCGCCTGGGGCACAAGCATCTCCGCCTGCACCGCACCACCCGCATCCGCACCAGCTCGCTTCAATCCCGCCGCCCGCTCGCACCGAGGGGCTCACCGTATAA
Protein Sequence: MCPRCQEQFENLHEFLYHKRLCDEKALQMGEERMHSDPEEMVVSGDEEMDGPNKRLEQVRRHRQDAENNNSLEDGEAEGPEADVPPVGLPFPVAGHVTLEALQNTKVAVAQFAATTMANNADNEAALHELAVLQSTLFTLQHQQVFQLQLIRQLQNQLSLTRRKDDPIQSPPPSEPEPSLPAPPVRSPSPPRPPREPTPVAPTPPTSQNLPSTHSHLTPKTEPLSVPKLPTSSPPIMSHPPYSSISSSLASSIITNNDPPPSLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRKSGKMSPYDGKSGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTSKFPHVKMNPNPVPEHLDKYHPPLLAQLSPGPIPGMPPHPLQFPPGAPAPFPPSLPLYRPTHHDILPPRPLGDKPLPPHPLFVMREEQEAPADLSKPSAPSPCQSGPEVKSEPQDEESQRDSSFEDTDRVSPKRELEENDTAPDPEQDRYPSTSPYDDSMDSKYSNEEQIGRESPHVKLDPDQPENLSSKNSPISGPISIATGLRTFPSYPLFPQSPPSSISSGSLTPFLNTVHNVVDVDLARDSMFYNSILPRPGSNDNSWESLIEITKTTETSKLQQLVDNIDNKVSDPNECIVCHRVLSCKSALQMHYRTHTGERPFRCKLCGRSFTTKGNLKTHMGVHRIKPPVQMLHQCPVCHKKFSDPSILHQHIRLHTGERASIPFDQMRNLDIDGFPSLSNGSDVSDYQAQRLFPPPMFPTPNTPGDRRADSHGTDDESGRDEREPAIREFDDDLDMKDRRTSPLSVCASASESELKTITTTASLPSATGSESGRSARASPPSPTMSTLSTPPRLPLHSPLPSPPTPIAALSALGGSPFSPLGLAFPPAVRGNTTCNLCYKTFACHSALEIHYRSHTKERPFKCTVCDRGFSTKSSGGGCRCGRRARASRPPHATALDLWNAFVYPGNMKQHMLTHKIRDVPPGFDKSQEDRESSPDRRSSPDKMDLKRSPPAHPPPQITHAPPIDMPPMPKRPTVPSAPTHPPPPVSSKHLCGVCRKNFSSSSALQIHMRTHTGDKPFRCAVCQKAFTTKGNLKVHMGTHMWSGGASRRGRRMSLELPPRPLHEPHELLRRPDLFYPYLPAPFLNGMQQKLNEISVIQQSAGQNGVAGKFPGLLGFGAFAGARPGAASPLERPPSLEGGDERQAAMRELAERGREFAERSRQMREEGEYRSPPAHGHPPPGAQASPPAPHHPHPHQLASIPPPARTEGLTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00689616;
90% Identity: iTF_00157463; iTF_00186539; iTF_01221862; iTF_01377745;
80% Identity: -