Esub027270.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia subfuscata
Gene Symbol
-
Assembly
GCA_963564075.1
Location
OY751123.1:1929967-1934342[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.049 3.9 8.9 2.7 1 23 158 181 158 181 0.95
2 16 4.2e-05 0.0034 18.6 1.0 1 23 190 213 190 213 0.97
3 16 0.065 5.3 8.5 0.5 2 23 226 248 226 248 0.96
4 16 0.00029 0.024 15.9 1.6 2 23 258 280 257 280 0.96
5 16 0.00013 0.01 17.0 1.7 2 23 293 315 292 315 0.96
6 16 7e-07 5.6e-05 24.2 0.5 1 23 343 366 343 366 0.97
7 16 2.9e-05 0.0023 19.1 1.2 2 23 376 398 375 398 0.96
8 16 0.19 15 7.1 1.4 2 19 403 420 402 422 0.92
9 16 0.00081 0.066 14.5 0.8 2 21 428 447 427 450 0.94
10 16 0.0035 0.28 12.5 0.5 3 23 460 481 459 481 0.97
11 16 3.4e-05 0.0028 18.8 2.9 1 23 486 509 486 509 0.95
12 16 0.052 4.2 8.8 4.5 1 23 520 543 520 543 0.93
13 16 6 4.8e+02 2.4 0.7 1 23 564 587 564 587 0.83
14 16 0.28 22 6.5 1.5 2 23 620 641 619 641 0.97
15 16 0.0048 0.39 12.1 0.2 1 23 707 729 707 729 0.97
16 16 0.22 18 6.9 2.0 1 23 735 758 735 758 0.96

Sequence Information

Coding Sequence
ATGTCACTGTCCCTACTAACAGAAAAAGAAATAAAGGTTGAAGATGACCGTAAAGACCCCACCTCTTTCCTTCCCCAAGAGGAAATGTGCTACGAGatcaaaaagaagaagaaaaagaaaaaaaagaagaaacaaGAGGATCCATTCAAAGATCTCGAAGGACCATTGACGCTGATACGAGAACCGGATATAACTGCTTTGGATCCGGATATTGGGAGCTTAGATCCAGAAGTGACCATCAAGGTTGAGGATATTGAAGTGGCTCTTAATATTAATGATTTTGACAACGACGACGGTCTCATAGAAGACGGTTACTCCGGAGACGCCCAATTAGAACCAGCAGTCAAGATCGAAGACCAGAACCGAGATCACGTTCTTCTTACCTTCCAAAACATCATCAGCGACAACTTAATCTCCGACAAACTCTTGAAACATGAGAAGATGTCACCACCTCTTGATTCTGGGGAGAATCATTTCTGCCAAGTCTGTCATCTTGCCTTTGGATCTGCTAGAACACTAGACGCCCATAGGAAACGATCGCATAAGAAATTCAGGCAGTCGTTCGTACATGTATGCAACGATTGCGGCATGTCATACGAGTTTAAGAATAGCTTAGTCGCTCATATTCGAAGAAAACACGGGCCTGACGCGAATAAAGATGATATGATGGAACGGTCCTGCGAAGTCTGCGCTCTAGTCTTTAAAGGGATAAACAGGCTAAGGATGCATATGAGAAGGAAACATGGTTCTCACGAAGACGCATTTAATATAGTTTGCAAGTATTGCGGATTGACGTACGATAAGCAATGTAGTCTTTTAGTACATATAAGAAGAAAACATACGCATAAGTCGAAGCCTAAAGCGAATTTGTGGCTGACTTGCCCGTTCTGCACgaaaacttttaataaaaggGAAACGTATGCGAGACATATTCAAAGGAATCATAAAGTTAGAGAAGAGGGAGACGAGGGGCAAATAGAAGAAGATAAGTTTAAAAAGGATTATCTGAATGAGAGGACAGGTGAATATGCTTGTAAGGAATGTCCCGCTAGCTTTTCAACTGCTAGCTATTTGAAATGGCATATGAAAAGGAAGCATAACGCAGAGATCGCGGACTTTAGACTCAAATGTAAGATCTGTAGTCTCTCCTACGCGAATTCGGAAAGTTTGAAGCGACATGTAAGAAGAAAACATGACAAAGATACCTACTGTTATGATTGTAATAGGAAATTCCCTGATAAACAAACTTATTTAGAACATTCTCATGCTAAAGATGTTAAGGAATGCACTATCTGTGGGTTGATTTTCGCGAATCAAGGCGGGCTGTCTAAACACTTGCGATGTACACACAAGCTGGATAGTCCTTTGACTGTGTTCTGTCCTATGTGTAACCAAGGTTTCTACAGCAAAAGACAGTTAAAACCACATATCAACCGTGTCCATCTAAAAGTAACATACACTTGCAAATATTGTAATAAAGTTTTCAAAACTAGAGATGTGTACAAAAGGCATGTGACGATCAAACATCTACACACGCCGCCACAAGATATGGAAACCCACCAGTGCGATAAATGTCTAGAAAAGTTCAAAGATGAATTCGATTTATGCAAGCATAACAATCTGGTACACGGTGATGTGTCTAGCATAGCTGTAGTCATAAAGAAGGAGGAAGATGATATTAAAAACGTCTTCAAGTGCACGAAATGTACAGATGAATATCTAAGCTGGGAGTTGCTACGAGTACACTTCGAGCAAACGCATCATATGACTGAAGAAGTACAGTGCCAAATATGCGGGGACCTAATGAGTCGAGGGGATTTAGTCAAGCACATCAAAGTCCACGATGAAATCGAAGTACAATGTCAATACTGCGAGTTTAAGAGCAAAAACCGGCTCAGCATGACTCAACATGTCCTAAGACACACCCATGCTCAAACTATACACTGTGACTACCCGAACTGTCGATACAAATCATTCTACGAACATGCCATGGTCAAACATAAGAAACGTCATCAAGAACTAGGGGTGAAACTACAGTGTGCCAGCTGCCCATTCCAAACTATGAACAAATACATCTTGAAGTACCACGAAGAAGCTCACGAGACAGGGAAAAAACGTTACCAGTGTGATAAGTGTGATTATGCCACAATACTGCCAGCGAATCTAGTGCAACATAAGTATAAACATTCCACAGAGAAGAAATTTAAGTGCGAAGTGTGTCCGTTCGCTACTAAGTATAATACGTCTTTGCGATTCCATGTGAAGAAAAAGCATTGTGATCTACCGACTTTGAGTTAG
Protein Sequence
MSLSLLTEKEIKVEDDRKDPTSFLPQEEMCYEIKKKKKKKKKKKQEDPFKDLEGPLTLIREPDITALDPDIGSLDPEVTIKVEDIEVALNINDFDNDDGLIEDGYSGDAQLEPAVKIEDQNRDHVLLTFQNIISDNLISDKLLKHEKMSPPLDSGENHFCQVCHLAFGSARTLDAHRKRSHKKFRQSFVHVCNDCGMSYEFKNSLVAHIRRKHGPDANKDDMMERSCEVCALVFKGINRLRMHMRRKHGSHEDAFNIVCKYCGLTYDKQCSLLVHIRRKHTHKSKPKANLWLTCPFCTKTFNKRETYARHIQRNHKVREEGDEGQIEEDKFKKDYLNERTGEYACKECPASFSTASYLKWHMKRKHNAEIADFRLKCKICSLSYANSESLKRHVRRKHDKDTYCYDCNRKFPDKQTYLEHSHAKDVKECTICGLIFANQGGLSKHLRCTHKLDSPLTVFCPMCNQGFYSKRQLKPHINRVHLKVTYTCKYCNKVFKTRDVYKRHVTIKHLHTPPQDMETHQCDKCLEKFKDEFDLCKHNNLVHGDVSSIAVVIKKEEDDIKNVFKCTKCTDEYLSWELLRVHFEQTHHMTEEVQCQICGDLMSRGDLVKHIKVHDEIEVQCQYCEFKSKNRLSMTQHVLRHTHAQTIHCDYPNCRYKSFYEHAMVKHKKRHQELGVKLQCASCPFQTMNKYILKYHEEAHETGKKRYQCDKCDYATILPANLVQHKYKHSTEKKFKCEVCPFATKYNTSLRFHVKKKHCDLPTLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00705364;
90% Identity
iTF_00705364; iTF_00696705; iTF_00698565; iTF_00699495; iTF_00700373; iTF_00702263; iTF_00704316; iTF_00701342; iTF_00697631;
80% Identity
-