Ecen015322.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia centaureata
Gene Symbol
-
Assembly
GCA_944548335.1
Location
CALYMU010000921.1:2523-8164[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.04 3.2 9.2 2.8 1 23 158 181 158 181 0.95
2 16 4.2e-05 0.0033 18.6 1.0 1 23 190 213 190 213 0.97
3 16 0.065 5.1 8.5 0.5 2 23 226 248 226 248 0.96
4 16 0.00044 0.035 15.4 1.4 3 23 259 280 257 280 0.96
5 16 0.00013 0.01 17.0 1.7 2 23 293 315 292 315 0.96
6 16 3.7e-06 0.00029 21.9 0.5 3 23 345 366 343 366 0.97
7 16 2.8e-05 0.0022 19.1 1.2 2 23 376 398 375 398 0.96
8 16 0.2 16 7.0 1.5 2 19 403 420 402 422 0.92
9 16 0.00081 0.064 14.5 0.8 2 21 428 447 427 450 0.94
10 16 0.0035 0.27 12.5 0.5 3 23 460 481 459 481 0.97
11 16 3.4e-05 0.0027 18.8 2.9 1 23 486 509 486 509 0.95
12 16 0.0088 0.69 11.3 5.0 1 23 520 543 520 543 0.93
13 16 0.0023 0.18 13.1 1.4 1 23 565 588 565 589 0.92
14 16 0.28 22 6.5 1.5 2 23 621 642 620 642 0.97
15 16 0.0048 0.38 12.1 0.2 1 23 708 730 708 730 0.97
16 16 0.22 17 6.9 2.0 1 23 736 759 736 759 0.96

Sequence Information

Coding Sequence
ATGTCGGTGTCTCTACTaacagaaaaagaaataaaggttGAAGATGACCGTAAAGACCCCACATCTTTCCTTCCACAAGAGGAGATGAGCTACGAGatcaaaaagaagaagaaaaagagaaaaaagaaGAAACAAGAGGATCCGTTCAAAGATGTTGAAGGGCCTTTAGTGGTGATACGAGAACCGGATATAACTGCTTTGGATCCGGATATAGGTAGTTTAGATCCAGAGGTGACGATCAAAGTTGAGGATATTGAAGTTGCTCTTAATATTGATGATTTTGACAATGACGACGGCCTTATTGAAGAAGGTTACTCCGAAAACGGCCAACTAGAACCAGTAGTCAAACTAGAAGATCAGAACAGAGACCACGTTCTTCTAACGTTCCAAAACATCATCAGCGACAACTTAATATCTGACAAACTCTTGAAAACTGAAAAGATGTCACCTCCGCACGATTCAGGAGAAAACCACTTCTGCCAAGTCTGTCACCTTGCATTTGGATCCGCTAAAACACTCGATGCCCACAGGAAAAGATCGCATAAGAAATTCAGACAGTCTTTCGCTCATGTTTGTAATGACTGCGGGATGTCATACGAGTTTAAGAACAGTTTAGTTGCTCATATTAGAAGAAAACACGGACCAGATGCAAATAACGACGATATGGTAGAACGGTCCTGTGAAGTCTGTGCTTTAGTTTTTAAAGGGATAAATAGACTACGGATGCATATGAGAAGGAAACATGGCTCTCATGAAGACGCTTTTAATATAGCTTGCAAGTATTGCGGATTGACATACGATAAGCAATGTAGTCTTTTAGTACATATAAGAAGAAAACATACGCATAAGTCTAAGCCTAAAGCTAATTTATGGCTGACTTGCCCGTTCTGTAcgaaaacttttaataaaagaGAAACATATGCGAGACATATTCAAAGGAATCATAAAGTTAGAGAAGATGATGATGAGGGAAAATTAGGagaagataaatttaaaaaggaTCATCTTAATGAGAAAACTGGTGAATATGGTTGTAAAGAGTGTCCGGCAAGCTTTTCAACTGCCAGCTATTTGAAATGGCATATGAAAAGGAAGCATAACGCTGAAATAGCGGATTTTAGACTCAAATGCAAGATCTGCAGTCTTTCCTACGCAAATTCGGAAAGTCTAAAACGACATGTAAGAAGAAAACATGACAATGATACCTATTGTTACGATTGCAATAGAAAATTTCCTGACAAACAAACATATTTAGACCATTCTCACGCTAAAGATGTTAAGGAATGCACTATCTGTGGGTTGATTTTTGCAAATCAAGGCGGATTGTCTAAACATTTACGATGTACCCACAAACTAGATAGTCCTTTGACAGTTTTCTGTCCTATGTGTAACCAAGGATTCTACAGCAAAAGGCAGCTAAAACCACATATCAACCGTGTCCATCTAAAAGTAACATACACTtgcaaatattgtaataaagttTTCAAAACTAGAGATGTGTATAAAAGGCATGTGACTATCAAACACTTACAAATACCACCTGAAGAGATGGAAACTCATCAGTGCGATAAATGCCAGGAAAAGTTCAAAGATGAATTTGATTTATGTAAGCATAACAATTTGGTACACGGTGATGTTTCTTCAATAGCTATTGTCATAAAGAAGGAAGAAATGGAAGATATTAAAAATGTCTTTAAATGCACGAAATGTACAGAGGAATATATAAGTTGGGATTTATTAAGAGCACATTTCGAGCAAAGCCATCATATGACGGAGGAAGTCCAGTGCCAAATATGCGGAGACCTGATGAGTCGAGGGGATCTAATCAAACACATCAAAATTCACGATGAAATCGAAGTACAATGTCAATACTGTGAATTCAAAAGCAAAAACCGACTCAGCATGACTCAACACGTTCTAAGACACACCCATGCTCAAACTCTACACTGTGACTATCCAAATTGTCGATATAAGTCATTCTATGAACATGCTATGGTCAAACATAAGAAACGTCATCAAGAACTAGGAGTTAAATTGCAGTGTGCAAGCTGCCCGTTCCAAACTATGAACAAATACATCCTAAAGTATCATGAGGAAGCTCATCAGACGGGAAAAAAGAGATACCAATGTGATAAATGTGATTATGCCACAATACTGCCAGCGAATCTAGTGCAACATAAGTATAAACATTCCACGGAAAAGAAATTTAAGTGTGAAGTGTGTCCGTTCGCAACTAAGTATAATACGTCTCTGCGATTCCATGTGAAGAAAAAACATTGTGATCTACCCACTTTGAGCTAA
Protein Sequence
MSVSLLTEKEIKVEDDRKDPTSFLPQEEMSYEIKKKKKKRKKKKQEDPFKDVEGPLVVIREPDITALDPDIGSLDPEVTIKVEDIEVALNIDDFDNDDGLIEEGYSENGQLEPVVKLEDQNRDHVLLTFQNIISDNLISDKLLKTEKMSPPHDSGENHFCQVCHLAFGSAKTLDAHRKRSHKKFRQSFAHVCNDCGMSYEFKNSLVAHIRRKHGPDANNDDMVERSCEVCALVFKGINRLRMHMRRKHGSHEDAFNIACKYCGLTYDKQCSLLVHIRRKHTHKSKPKANLWLTCPFCTKTFNKRETYARHIQRNHKVREDDDEGKLGEDKFKKDHLNEKTGEYGCKECPASFSTASYLKWHMKRKHNAEIADFRLKCKICSLSYANSESLKRHVRRKHDNDTYCYDCNRKFPDKQTYLDHSHAKDVKECTICGLIFANQGGLSKHLRCTHKLDSPLTVFCPMCNQGFYSKRQLKPHINRVHLKVTYTCKYCNKVFKTRDVYKRHVTIKHLQIPPEEMETHQCDKCQEKFKDEFDLCKHNNLVHGDVSSIAIVIKKEEMEDIKNVFKCTKCTEEYISWDLLRAHFEQSHHMTEEVQCQICGDLMSRGDLIKHIKIHDEIEVQCQYCEFKSKNRLSMTQHVLRHTHAQTLHCDYPNCRYKSFYEHAMVKHKKRHQELGVKLQCASCPFQTMNKYILKYHEEAHQTGKKRYQCDKCDYATILPANLVQHKYKHSTEKKFKCEVCPFATKYNTSLRFHVKKKHCDLPTLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00705364;
90% Identity
iTF_00703309;
80% Identity
-