Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007550.1:3521415-3525143[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.18 13 7.1 0.3 2 23 75 97 74 97 0.95

2 15 0.14 10 7.4 0.1 5 23 127 145 123 145 0.90

3 15 0.00081 0.058 14.5 0.2 1 23 149 172 149 172 0.98

4 15 0.0026 0.19 12.9 0.5 1 20 176 195 176 197 0.93

5 15 0.0043 0.31 12.2 0.7 3 23 253 274 252 274 0.96

6 15 0.45 32 5.8 0.0 2 23 299 321 298 321 0.92

7 15 0.17 12 7.1 0.7 3 23 346 366 345 366 0.97

8 15 0.00048 0.034 15.2 0.7 1 21 370 390 370 391 0.96

9 15 0.069 4.9 8.4 0.5 1 23 432 455 432 455 0.90

10 15 0.16 11 7.2 0.7 2 23 481 503 480 503 0.95

11 15 0.037 2.6 9.2 1.9 2 23 527 548 526 548 0.94

12 15 0.002 0.14 13.2 0.0 1 23 552 575 552 575 0.97

13 15 0.44 31 5.9 0.4 1 23 579 602 579 602 0.97

14 15 0.0022 0.16 13.1 2.8 1 23 641 664 641 664 0.97

15 15 6.1e-05 0.0043 18.0 0.5 1 23 674 697 674 697 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.18	13	7.1	0.3	2	23	75	97	74	97	0.95
2	15	0.14	10	7.4	0.1	5	23	127	145	123	145	0.90
3	15	0.00081	0.058	14.5	0.2	1	23	149	172	149	172	0.98
4	15	0.0026	0.19	12.9	0.5	1	20	176	195	176	197	0.93
5	15	0.0043	0.31	12.2	0.7	3	23	253	274	252	274	0.96
6	15	0.45	32	5.8	0.0	2	23	299	321	298	321	0.92
7	15	0.17	12	7.1	0.7	3	23	346	366	345	366	0.97
8	15	0.00048	0.034	15.2	0.7	1	21	370	390	370	391	0.96
9	15	0.069	4.9	8.4	0.5	1	23	432	455	432	455	0.90
10	15	0.16	11	7.2	0.7	2	23	481	503	480	503	0.95
11	15	0.037	2.6	9.2	1.9	2	23	527	548	526	548	0.94
12	15	0.002	0.14	13.2	0.0	1	23	552	575	552	575	0.97
13	15	0.44	31	5.9	0.4	1	23	579	602	579	602	0.97
14	15	0.0022	0.16	13.1	2.8	1	23	641	664	641	664	0.97
15	15	6.1e-05	0.0043	18.0	0.5	1	23	674	697	674	697	0.95

Sequence Information

Coding Sequence: ATGACGAAAAGGAACGCTGAGATCGTGTTACAGTATTCCACGCTGTACCCATTCAGGTTGCGAGGGAAAATCTTAATCTGCGTATATTGCTGTGACGAATTCGACGAACCAGACCCGTACCGATGCCATATGGACGAAAACCATAAGACTCCGATACTTTTTACTGCGTTTGCGCACACGGGGAGGAACAGAGATTATCTGAAAGTCGACTGCGTCAATCTGAAATGCAGATTATGCAATGCACCTTTCGATAACATCAATCAAATCGCTAAACACCTTAAGAACAATCACAATAATGATGATATCGAAAAACTTAATTTGAGCTACGAAGTGGGCTTGCAACCATACCGTTTAGTAAAAGACAACTGGGTCTGCATAACTTGTAATGCCAGGCTGCCCTCTTTAGCGAAGCTCCGCAGACATATGGCGACGCATTTTGCGGGCTACGTTTGCGATATTTGTGGCAGTAGCTACATTAAAGTTGATAGCTTGCAATATCACGTGAGATCGACGCACTCCGGTAAATTCCCGTGCAGAAAATGCTGGAAGGTTTTCTCAACTAAAGAAGAAAAGAAACAGCACGCTAAAGCTTCGCCAGCTTggtCCAAATTGGAAATAAGAGGACGTAGAAAGGGAAAAACTGATGACAAAAAGAAAATAGTCCTTGTTACCCAGACACCGCAAAGGCATAATGCCGAACTCATATTCAATCACTCTACCGCTTATCCCTTCAAAACACGTTTTAGTCAGATTTTATGTGGTTTTTGCCATGAGGAGTACAACACACTGTCCGAACTCCGCTATCACATGTCTATCGATCATGTACATTCCGATTACAGTAACATTTTCTACAGAATAAACGATAACTTGATCAAAGTCGATATAACAGacttaaaatgcaaaatttgcTCTTTGGCGATACCTGACGTAGATACTCTGATGAGTCATTTGGCACAGGAACACAAAAAACCAGTGAAGTTTGACGCGCGCTTTGGGGTTCTCCCCTATAAACAGAACGCAGACAATCAATGGTTATGTGTATATTGCCAGAGAAATTACACGGAGTTTATATCATTCAAACGTCATGTAGGAACGCATTTCATGAATTTCACTTGTGACAAATGTGGAACCAGTTTTGTGTCTGATCGTGCGTTACGTGATCACCATCGGCAAGTCAAATGCTTCAGAACCGCATACCATCCTCGCAACGGGAAAATCATGAGGTCACGGGGCAACGCTGAGATACTCCTACAATGTTCCACCGTTTGCCCCTTTAGGACTTGGAAAAACAACTTTCATTGTGTATTTTGTCGCATTCAAACAAACGATCCGAGTAATCTAAGAGTTCACGTGGCAGCGCGTCACCCCAACTATGAAGTACAAACGGCATTTTATAAGAAGCTCGGAAAAGATTTTTTGAGTGTTGACGTAACAGACATTCAGTGCAAGCTCTGCTTTACCCCTCTGTCAACCATTGACGCTCTAACTTACCACTTGAAACATGACCATCAGCAACCTATCAACTTAGATGCGCAATTGGGATTGCTGCCATTCAGACTGAACGATGGCTCCGTATGGAAATGCACAATGTGCACAAATCAGTTCAAAGACTTCATATCTTTGAAGAAGCACACATCTGATCATTTTCAAAACTATGTTTGTGATGCTTGTGGCGAAGGGTTCATCACGGAGTCAGCTATGATAGCGCACACGAAGATACCGCACGAAAATAAGTACAATTGCAATAGGTGTATCGCGACTTTTTCTTCAGAGGAAGAAAGAAATATTCACGTAAAGACACAGCACACTTCGATGCCGTATATGTGCATTTACTGCGCGAATAAACCGCGTTTCGCCAACTGGGAGCTGCGCAAGAAACACCTCATGGAAGTTCACAACTATAAGACTGGAGCTGATAAATACGAATGTACTGCCTGTCAGAAAACATTCAAAACGCGATCTGGGAAATACAATCATATGACGAGAACgcacaaaataaagaaagacGCAGAGCTGAATTACCCATGTGCAAATTGCCCAAAAGCGTTTACAACTAAACTTTTTCTAGAAAGGCACATGGGTAAAAAGCATTTTGATGATTAA
Protein Sequence: MTKRNAEIVLQYSTLYPFRLRGKILICVYCCDEFDEPDPYRCHMDENHKTPILFTAFAHTGRNRDYLKVDCVNLKCRLCNAPFDNINQIAKHLKNNHNNDDIEKLNLSYEVGLQPYRLVKDNWVCITCNARLPSLAKLRRHMATHFAGYVCDICGSSYIKVDSLQYHVRSTHSGKFPCRKCWKVFSTKEEKKQHAKASPAWSKLEIRGRRKGKTDDKKKIVLVTQTPQRHNAELIFNHSTAYPFKTRFSQILCGFCHEEYNTLSELRYHMSIDHVHSDYSNIFYRINDNLIKVDITDLKCKICSLAIPDVDTLMSHLAQEHKKPVKFDARFGVLPYKQNADNQWLCVYCQRNYTEFISFKRHVGTHFMNFTCDKCGTSFVSDRALRDHHRQVKCFRTAYHPRNGKIMRSRGNAEILLQCSTVCPFRTWKNNFHCVFCRIQTNDPSNLRVHVAARHPNYEVQTAFYKKLGKDFLSVDVTDIQCKLCFTPLSTIDALTYHLKHDHQQPINLDAQLGLLPFRLNDGSVWKCTMCTNQFKDFISLKKHTSDHFQNYVCDACGEGFITESAMIAHTKIPHENKYNCNRCIATFSSEEERNIHVKTQHTSMPYMCIYCANKPRFANWELRKKHLMEVHNYKTGADKYECTACQKTFKTRSGKYNHMTRTHKIKKDAELNYPCANCPKAFTTKLFLERHMGKKHFDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661641;
90% Identity: iTF_00699522;
80% Identity: -