Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007520.1:6637818-6649526[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0064 0.46 11.6 0.1 3 20 195 212 194 214 0.97

2 12 0.056 4 8.7 0.0 3 23 257 277 256 277 0.96

3 12 2.2 1.5e+02 3.7 0.2 2 23 346 368 345 368 0.94

4 12 0.1 7.3 7.9 0.2 2 20 374 392 373 394 0.90

5 12 0.00034 0.025 15.6 1.8 1 23 402 425 402 425 0.97

6 12 3.1e-05 0.0022 18.9 1.2 1 23 446 468 446 468 0.98

7 12 2.5e-07 1.8e-05 25.5 1.9 1 23 475 497 475 497 0.98

8 12 2.8e-07 2e-05 25.3 1.4 3 23 511 531 509 531 0.96

9 12 1.3e-06 9e-05 23.3 0.8 1 23 537 559 537 559 0.99

10 12 1.7e-06 0.00012 22.9 2.8 2 23 566 587 565 587 0.96

11 12 5.7e-07 4.1e-05 24.4 1.4 1 23 593 615 593 615 0.99

12 12 0.0044 0.31 12.2 0.1 1 23 621 643 621 643 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0064	0.46	11.6	0.1	3	20	195	212	194	214	0.97
2	12	0.056	4	8.7	0.0	3	23	257	277	256	277	0.96
3	12	2.2	1.5e+02	3.7	0.2	2	23	346	368	345	368	0.94
4	12	0.1	7.3	7.9	0.2	2	20	374	392	373	394	0.90
5	12	0.00034	0.025	15.6	1.8	1	23	402	425	402	425	0.97
6	12	3.1e-05	0.0022	18.9	1.2	1	23	446	468	446	468	0.98
7	12	2.5e-07	1.8e-05	25.5	1.9	1	23	475	497	475	497	0.98
8	12	2.8e-07	2e-05	25.3	1.4	3	23	511	531	509	531	0.96
9	12	1.3e-06	9e-05	23.3	0.8	1	23	537	559	537	559	0.99
10	12	1.7e-06	0.00012	22.9	2.8	2	23	566	587	565	587	0.96
11	12	5.7e-07	4.1e-05	24.4	1.4	1	23	593	615	593	615	0.99
12	12	0.0044	0.31	12.2	0.1	1	23	621	643	621	643	0.98

Sequence Information

Coding Sequence: ATGGCAAGTTTGAGTGAAAATATCGAGATAAAGATTGAAAAATTGTGTCGAACATGTTTGTCGAAAGACAATGAATTGAATTCATTGTTTGATGTTATTGTTGGGGAAGTATCATTAGATACCATAGTAACAGCAATAACTGGACTAAAGATTCGCAAAGGGGATGGACTGCCCACTACTATATGCTATGACTGCAGAGAGAAAGCGGTGAAGgcttacaattttaaaaagaaatccCAGGAGGCCTATGTTTCACTGAAGGGAttctataaagaaaataaaaacaatttatttgattatgatTCAAACAATCAGAAAGCCATTGATTTTAAAACTGAAGATTCCGAATTCTTCAGTGATCGTGATGATTTTTCCGATGTCGATTATATTATGCCGCTTAAAAATGGACAGGCCGATCTAGATGATTTGGATGTCAAGATTAAAGTTAAACATGAAAGCGCTAATAGGGATTTCATAGAGTGCAAGAAATGCTGTCTGATATTTCAAACTCGAGCAAAGTATCAAGAACACAAAAAACACAAATGTGTcaaagTGGAATATGAAGACGCAAGCGGTGCGCATTGCCCTATTTGCGGCACCAGTTACGACGGTGCAAAAAGTCTGTCCAATCATATGTGGGAGTTTCATGCAGAAGTCATGGGCCCCAAGAAAAGAGGACGTCCAAAGAAGGCTATGACATcgACAATACTCAATAAACTATCTGAAAATGGGTTCTTTATTAAATCGGTTCAAGGAAAGAAGGTTGATTGTGGATTTTGCAATGAACAGGTTGACTCCAAAGAAGAGCTGATAGTGCATATGCTCGACCACAGTgATATTGCAGTATTGTGCTGTACCACATGCAAGAAAATGTtcctaaaaaagaaaaagtttatAACACATTCATGTACAGACAGCAATAAAACTTCGAGTAAACCAGACAGAGAAAGTACATCTTCGGCATTAGCAAAAATGTCAGAAATCATCTTACAAGATCTTTTTGAAAGTTATCAGACGAATGCATCTGCGATTCAAGTGTGCAGTTCTTGCAGCGCCGTGCTGTTCTCGGAAGCTGATCTAATAAATCATCATGATACCGAACACCCGGAGCTGTCGCTACGATGCAACCACTGTGCCAAGGTGTTCGCCTCCGTGAAGACCGCCGCGCGGCACCGGAGCGCGTGCAAGGATATAGACCGCACGCACCGCTGCACTACTTGCGGACTCAAGTTCGCCTACGAGATATCTCTGAACAAGCACATCCTGAGATACCACCAGGGAGAGAAGGTCTCGGTGGCCCATAAAGCGAGGGCCAAGCCCACTGATAACATTCAGTATCAATGCGACACGTGTAATAAGTTTTTCCAAAGAAAAGAAGCACTTGCTAAGCACGCGAAGTTGCACATGCCGAATCAAAAACTTTATGAATGCGACATATGCCAAAAGAAGTTCAACAGAAGTGACAATTTGCGCACCCACAAGCGCATCCACGACGCGGACCGTCCGAAGGCGGCGAGCAACAACCACCTGTGCCTGTACTGCGGCCGCGGCTTCTCCAACTCGTCCAACCTCATCGTGCATATGCGCCGCCACACCGGCGAGAAGCCCTACAAGTGCGACTTCTGCGAGAAAGGTTTTCCGAGGTCTTCTGACCTCATGGTACACCGGCGCTCACACACTGGCGAGAAACCTTGCGTGTGCCGACTCTGCGGGAAAGCGTTCTCCCGCAGCAACAAGCTGTCGCGTCACATGCGCGTGCACACGGGCCAGCGCCCCTACAAGTGCTCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTGACGCTCCACGTGCGGCGACACACCGGCGACCGTCCCTACGTCTGCGGGGTCTGCGGGGACCGGTTCATACAGGGCACGGCGCTGCAGAACCACCGCAGGGCTCACGGACACTTCAGCGCGGCGATGGCGCCCGGCGCGCCGCACCTCGTGGAGCCGCTCGCGTACGCCGCCGCCGGCCTCGCCCACCACGACGACTCGCACCTGTCCAACACCATCGCCTCTATCTAG
Protein Sequence: MASLSENIEIKIEKLCRTCLSKDNELNSLFDVIVGEVSLDTIVTAITGLKIRKGDGLPTTICYDCREKAVKAYNFKKKSQEAYVSLKGFYKENKNNLFDYDSNNQKAIDFKTEDSEFFSDRDDFSDVDYIMPLKNGQADLDDLDVKIKVKHESANRDFIECKKCCLIFQTRAKYQEHKKHKCVKVEYEDASGAHCPICGTSYDGAKSLSNHMWEFHAEVMGPKKRGRPKKAMTSTILNKLSENGFFIKSVQGKKVDCGFCNEQVDSKEELIVHMLDHSDIAVLCCTTCKKMFLKKKKFITHSCTDSNKTSSKPDRESTSSALAKMSEIILQDLFESYQTNASAIQVCSSCSAVLFSEADLINHHDTEHPELSLRCNHCAKVFASVKTAARHRSACKDIDRTHRCTTCGLKFAYEISLNKHILRYHQGEKVSVAHKARAKPTDNIQYQCDTCNKFFQRKEALAKHAKLHMPNQKLYECDICQKKFNRSDNLRTHKRIHDADRPKAASNNHLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCEKGFPRSSDLMVHRRSHTGEKPCVCRLCGKAFSRSNKLSRHMRVHTGQRPYKCSYCEKAFSQSNDLTLHVRRHTGDRPYVCGVCGDRFIQGTALQNHRRAHGHFSAAMAPGAPHLVEPLAYAAAGLAHHDDSHLSNTIASI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702189; iTF_00701315; iTF_00698526; iTF_00700350; iTF_00699426; iTF_00706244; iTF_00699462; iTF_00706279; iTF_00697604; iTF_00705273; iTF_00705331; iTF_00703226; iTF_00704239; iTF_00704276; iTF_00703262;
90% Identity: iTF_00702189;
80% Identity: iTF_00702189;