Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: -
Assembly: GCA_949316285.1
Location: OX438642.1:15718019-15728793[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0084 0.71 11.4 0.1 3 20 153 170 152 172 0.97

2 11 0.052 4.5 8.8 0.0 3 23 215 235 214 235 0.96

3 11 0.096 8.2 8.0 0.2 2 20 308 326 307 328 0.90

4 11 0.00066 0.056 14.8 2.0 1 23 336 359 336 359 0.97

5 11 1.6e-05 0.0014 19.9 0.9 1 23 380 402 380 402 0.98

6 11 2.3e-07 2e-05 25.7 1.9 1 23 409 431 409 431 0.98

7 11 2.6e-07 2.3e-05 25.5 1.4 3 23 445 465 443 465 0.96

8 11 1.2e-06 0.0001 23.5 0.8 1 23 471 493 471 493 0.99

9 11 1.6e-06 0.00014 23.0 2.8 2 23 500 521 499 521 0.96

10 11 4.9e-07 4.2e-05 24.7 1.5 1 23 527 549 527 549 0.99

11 11 0.0074 0.63 11.5 0.1 1 23 555 577 555 577 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0084	0.71	11.4	0.1	3	20	153	170	152	172	0.97
2	11	0.052	4.5	8.8	0.0	3	23	215	235	214	235	0.96
3	11	0.096	8.2	8.0	0.2	2	20	308	326	307	328	0.90
4	11	0.00066	0.056	14.8	2.0	1	23	336	359	336	359	0.97
5	11	1.6e-05	0.0014	19.9	0.9	1	23	380	402	380	402	0.98
6	11	2.3e-07	2e-05	25.7	1.9	1	23	409	431	409	431	0.98
7	11	2.6e-07	2.3e-05	25.5	1.4	3	23	445	465	443	465	0.96
8	11	1.2e-06	0.0001	23.5	0.8	1	23	471	493	471	493	0.99
9	11	1.6e-06	0.00014	23.0	2.8	2	23	500	521	499	521	0.96
10	11	4.9e-07	4.2e-05	24.7	1.5	1	23	527	549	527	549	0.99
11	11	0.0074	0.63	11.5	0.1	1	23	555	577	555	577	0.97

Sequence Information

Coding Sequence: ATGACACTGAGTGATTGCTTTCAGATTCGCAAAGGAGATGGGCTGCCTACTACAATATGCTATGACTGCAGGGAGAAGGCAGAGAAGgcttacaattttaaaaagaaatcGCAGGAGGCCTATGCTTCACTGAAGGGCTtctttaaagaaaataaaaacaatttgtttgGCTATGATGATTCTAACAATcagAAAGCGATTGATTTTAAAACCGAGGATTCAGATTTATTCAGCGATCGTGATGATTTTTCTGATGTCGATTATAGTCTGCCACTGAAAAATGGACCGTCTGATTTAGATGATTTGGAACTCAAGATTAAAGTTAAACACGAGAGTGCTAATAGGGACTTCATAGAGTGCAAGAAATGCTGTCTGATATTTCAAACACGAGCGAAGTATCAGGAACACAAGAAGCACAAATGTGtaaaagTGGAATTAGAAGATTCAAACGCGCATTGCCCTATTTGTGGCACAAGTTATGACGGTGCGAAAACTCTGTCCAATCATATGTGGGAATTTCATGCAGAAGTCATGGGCCCCAAGAAAAGAGGACGTCCGAGAAAAGCTATGACATCGACAATACTCAGTAAACTATCTGAAAATGGGTTCTTCATTAAGTCGGTTCAAGGAAACAAGGTCGACTGTGGATTTTGCAATGAACAGGTTGACTCCAAAGAAGAGCTGATTGTGCATATGCTCGACCACAGTGatgTTGCAGTATTGTGCTGTAATGTGTgcaagaaaatgtatctaaaaaagaaaaagtttgCAACACATTTGTGTACAGACAATAACAAAACTTTGAGTAAAACAGACGGAAACGCGTCGGCGATTCAAGTGTGCAGTTCTTGCAGCGCCGTGCTCCTGTCAGAAGCTGATCTAATAAATCATCATGACACCGAGCACCCGGAGCTGTCGTTACGATGCAACCACTGTGCCAAGGTATTCGCATCTGTGAAGACCGCTGCTCGCCACAGAAGTGCGTGCAAAGAGATCGACAGGACACACAGATGCACAACATGCGGCCTCAAGTTCGCGTTTGAAATATCACTCAATAAGCACATTTTGAGATACCATCAGGGAGAGAAAGTTTCCGTTGCTCACAAAGCGAGGGCTAAGCCTACTGATAATGTTCAATATCAATGCGACACCTGTGATAAGTTTTTCCAAAgAAAAGAGGCACTTGCTAAGCACGCAAAGTTGCACATGCcgaatcaaaaactttatgAATGTGATATATGCCAAAAGAAATTCAACAGAAGCGACAATTTGCGTACCCACAAACGCATCCACGACACCGACCGGCCGAAGCCCCCCACCAACAATCACCTATGCCTGTACTGCGGTCGAGGATTCTCCAATTCCTCAAATCTCATCGTACATATGCGGCGTCACACCGGGGAGAAGCCGTACAAGTGTGACTTTTGCGAAAAAGgttttcCAAGGTCCTCTGACCTCATGGTTCACAGGCGATCACACACTGGCGAGAAGCCTTGCGTCTGCCGTCTTTGTGGGAAAGCGTTCTCGCGCAGCAACAAGCTATCCCGCCACATGAGAGTGCACACCGGACAAAGACCTTACAAGTGTACTTACTGCGAGAAGGCCTTCTCTCAGAGCAACGACCTGACACTGCATGTGCGGCGACACACAGGGGACCGGCCATACATCTGCGGAGTCTGCGGAGACAGGTTCATACAGGGCACGGCTTTACAGAACCATCGCAGGGCTCACGGCCATTTCAGCACGCCGATCACTCCCGGCATTCCCAACCAAGTGGAAGCTATCACGTACGCAGTCGCTAGCTTAGCGCACCACGATGATTCTCACATGTCTAACACTATAGCATCTATCTAG
Protein Sequence: MTLSDCFQIRKGDGLPTTICYDCREKAEKAYNFKKKSQEAYASLKGFFKENKNNLFGYDDSNNQKAIDFKTEDSDLFSDRDDFSDVDYSLPLKNGPSDLDDLELKIKVKHESANRDFIECKKCCLIFQTRAKYQEHKKHKCVKVELEDSNAHCPICGTSYDGAKTLSNHMWEFHAEVMGPKKRGRPRKAMTSTILSKLSENGFFIKSVQGNKVDCGFCNEQVDSKEELIVHMLDHSDVAVLCCNVCKKMYLKKKKFATHLCTDNNKTLSKTDGNASAIQVCSSCSAVLLSEADLINHHDTEHPELSLRCNHCAKVFASVKTAARHRSACKEIDRTHRCTTCGLKFAFEISLNKHILRYHQGEKVSVAHKARAKPTDNVQYQCDTCDKFFQRKEALAKHAKLHMPNQKLYECDICQKKFNRSDNLRTHKRIHDTDRPKPPTNNHLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCEKGFPRSSDLMVHRRSHTGEKPCVCRLCGKAFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLTLHVRRHTGDRPYICGVCGDRFIQGTALQNHRRAHGHFSTPITPGIPNQVEAITYAVASLAHHDDSHMSNTIASI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702237;
90% Identity: iTF_00705273;
80% Identity: iTF_00704239;