Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010000218.1:32907-52559[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0059 0.47 11.8 0.1 3 20 196 213 195 215 0.97

2 11 0.051 4.1 8.8 0.0 3 23 258 278 257 278 0.96

3 11 0.095 7.5 8.0 0.2 2 20 310 328 309 330 0.90

4 11 0.00099 0.078 14.2 3.6 1 23 338 361 338 362 0.96

5 11 8.5e-05 0.0067 17.6 1.1 1 23 382 404 382 404 0.98

6 11 2.3e-07 1.8e-05 25.7 1.9 1 23 411 433 411 433 0.98

7 11 2.6e-07 2.1e-05 25.5 1.4 3 23 447 467 445 467 0.96

8 11 1.2e-06 9.2e-05 23.5 0.8 1 23 473 495 473 495 0.99

9 11 1.6e-06 0.00013 23.0 2.8 2 23 502 523 501 523 0.96

10 11 4.9e-07 3.8e-05 24.7 1.5 1 23 529 551 529 551 0.99

11 11 0.0072 0.57 11.5 0.1 1 23 557 579 557 579 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0059	0.47	11.8	0.1	3	20	196	213	195	215	0.97
2	11	0.051	4.1	8.8	0.0	3	23	258	278	257	278	0.96
3	11	0.095	7.5	8.0	0.2	2	20	310	328	309	330	0.90
4	11	0.00099	0.078	14.2	3.6	1	23	338	361	338	362	0.96
5	11	8.5e-05	0.0067	17.6	1.1	1	23	382	404	382	404	0.98
6	11	2.3e-07	1.8e-05	25.7	1.9	1	23	411	433	411	433	0.98
7	11	2.6e-07	2.1e-05	25.5	1.4	3	23	447	467	445	467	0.96
8	11	1.2e-06	9.2e-05	23.5	0.8	1	23	473	495	473	495	0.99
9	11	1.6e-06	0.00013	23.0	2.8	2	23	502	523	501	523	0.96
10	11	4.9e-07	3.8e-05	24.7	1.5	1	23	529	551	529	551	0.99
11	11	0.0072	0.57	11.5	0.1	1	23	557	579	557	579	0.97

Sequence Information

Coding Sequence: atggCAGCTTCAAGTCAGAAGATAGAGATAAAGATTGAAAAATTGTGTCGAACGTGTTTATCGAAAGACAATGAATTGAATTCACTGTTTGACGTTATTGTTGGAGAAGTATCCTTAGATTTCATAGTGACAGCAATTACTGGACTAAAGATCCGCAAAGGGGATGGGCTGCCTACGACAATATGCTATGACTGCAGGGAAAAGGCAGTGAgggcttttgattttaaaaagaaaTCACAGGAAGCCTATGTTTCATTGAAGGGAttctataaagaaaataaaaacaatttaattggCTACAATGATCCTAACAATCAGAAATCCATTGATTTTAAAACCGAGGAATCTGATTTCTTCATTGATCGCGATGATTTTTCTGATGTCGATTATAGTATGCCGCTGAAAAATGGACCGACTGATTTGGATGAGTTGGAACTCAAGATTAAAGTTAAACACGAGAGTGCAAATAGGGAATACATAGAGTGCAAAAAATGCTGCCTGATATTTCAAACACGAGCAAAGTATCAAGAACACAGGAAACACAAATGTGTAAAAGTGGAATTGGAAGATACAAATAGCGCGCATTGCCCTATTTGTGGTACAAGTTATGACGGTGCGAAAAGTCTCTCCAATCATATGTGGGAATTTCATGCAGATGTAATGGGCCCTAAGAAAAGAGGCCGTCCAAAGAAGGCAATGACATCGACAATACTTAGTAAACTATCCGAAAATGGGTTCTTTATTAAGTCCGTACAAGGGAGGAAGGTAGACTGTGGATTTTGCAACGAGCAGGTGGATTCCAAAGAAGAGCTAATTGTGCATATGCTCGACCACAgtgTTCAAGTGTGCAGTTCTTGCAGCGCCGTGCTTCTGTCCGAAACCGACCTAATAAATCATCATGACACCGAGCACCCAGAGCTTTCGTTACGATGCAACCACTGTGCTAAGGTATTCGCATCTGTGAAGACCGCTGCTCGGCACAGAAGTGCGTGCAAAGAGATCGACAGGACACACAGGTGCACGACGTGTGGGCTCAAATTCGCCTACGAAATATCACTCAATAAGCACATCCTGAGATACCACCACGGAGAGAAAGTGTCCATTGCTCATAAAGGGAGGGTCAACCCTTCTGACAACGTTCAATATCAATGCGACTCTTGTAATAAGTTTTTCCAAAGaaaagaAGCACTTGCCAAGCATGCGAAGTTGCATATGCCGAATCAAAAACTTTATGAATGTGATATATGCCAAAAGAAATTCAACAGAAGTGATAATTTACGGACCCACAAACGCATCCACGACACCGACCGGCCAAAGCCTCCCACCAACAACCACCTGTGCCTGTACTGCGGCCGAGGATTCTCCAACTCCTCTAATCTCATCGTGCACATGCGGCGTCACACTGGGGAAAAACCGTACAAGTGTGACTTTTGCGAAAAAGGTTTCCCAAGATCCTCTGATCTCATGGTTCATCGACGATCACATACTGGCGAGAAACCTTGCGTCTGCCGTCTTTGTGGGAAAGCATTCTCGCGCAGCAACAAACTTTCTCGCCACATGCGCGTGCACACTGGACAAAGGCCCTACAAATGCACTTACTGCGAAAAGGCTTTTTCTCAGAGCAATGACCTGACACTGCATGTGCGGAGACACACGGGGGACCGGCCCTACATCTGTGGGGTCTGCGGAGACAGGTTCATACagGGAACGGCTTTACAGAACCATCGCAGAGCCCACGGCCATTTCAGCGCTCCCATCACGCCCGTCATTCCAAACCAAGTGGAAGCTATCACGTACGCCGTCAATAACTTAAATCACCACGATGATTCTCACATTTCTAACACTATAGCGTCTATTTAG
Protein Sequence: MAASSQKIEIKIEKLCRTCLSKDNELNSLFDVIVGEVSLDFIVTAITGLKIRKGDGLPTTICYDCREKAVRAFDFKKKSQEAYVSLKGFYKENKNNLIGYNDPNNQKSIDFKTEESDFFIDRDDFSDVDYSMPLKNGPTDLDELELKIKVKHESANREYIECKKCCLIFQTRAKYQEHRKHKCVKVELEDTNSAHCPICGTSYDGAKSLSNHMWEFHADVMGPKKRGRPKKAMTSTILSKLSENGFFIKSVQGRKVDCGFCNEQVDSKEELIVHMLDHSVQVCSSCSAVLLSETDLINHHDTEHPELSLRCNHCAKVFASVKTAARHRSACKEIDRTHRCTTCGLKFAYEISLNKHILRYHHGEKVSIAHKGRVNPSDNVQYQCDSCNKFFQRKEALAKHAKLHMPNQKLYECDICQKKFNRSDNLRTHKRIHDTDRPKPPTNNHLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCEKGFPRSSDLMVHRRSHTGEKPCVCRLCGKAFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLTLHVRRHTGDRPYICGVCGDRFIQGTALQNHRRAHGHFSAPITPVIPNQVEAITYAVNNLNHHDDSHISNTIASI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702237;
90% Identity: -
80% Identity: -