Eint020796.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759198.1:5922543-5940003[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00019 0.014 16.5 3.6 1 23 283 305 283 305 0.98 2 12 0.91 67 4.9 4.4 1 23 313 336 313 336 0.89 3 12 1.2 90 4.5 1.2 1 23 340 363 340 363 0.94 4 12 0.16 11 7.3 2.3 1 23 429 451 429 451 0.98 5 12 0.014 1 10.6 4.4 2 23 460 482 459 482 0.96 6 12 0.0006 0.044 14.9 2.5 1 23 513 536 513 536 0.96 7 12 0.026 1.9 9.7 2.5 1 23 540 563 540 563 0.90 8 12 0.049 3.6 8.8 0.0 3 20 583 600 582 602 0.94 9 12 0.57 42 5.5 0.1 3 23 666 687 665 687 0.89 10 12 1.1e-05 0.00079 20.4 0.6 1 23 696 718 696 718 0.98 11 12 0.0027 0.2 12.8 1.1 3 23 726 746 724 746 0.96 12 12 8.6e-06 0.00063 20.7 2.7 1 23 752 775 752 775 0.98
Sequence Information
- Coding Sequence
- ATGTGGGACGTGAAAGTCTGTGCTGTGTGTCTCAGCACCAGCATTAAGCTTTACAGCTTGAACTCCGGCAATTTACGCCATGAATTCAACTGTGTTTCCGGGCTAAAGACTTCTACTGGTAGCGGTCTGCCTGATTACCTGTGTGTAGAATGCCTTGCATATGTAAAGAAATTCATGAGATACAGGCAAAGATGCCATCGGGCACATTACATCTTGAAGCAGCTTCTGAATAGCAATAAAGAGATAAAAGAGTTCCACCTGACCTCAATAGACAGAGAGAAACTAGGTGTCTTGTCACCTCTGTCATTAATTGATAAATCCCAATTTCACTATGAAACTCACATTTACCAGTGGCCCGCAACAGACTTCAGTTCTACCAATCAGGCAAGAACCAACTACAATGTACCAATTCTACATTATAGTACATTATCCAAAGAAGAAACTTTTGAAGATGTCATGACTACATCTACTGCTTATAAGAATGATAGAATTGTCAAAGTTGAGCCTGAtaataaaacagatttaaaaaaaaccaggAGAAAGAAAAAACATGAACCTAAAGCTTTAAAAACTGATATAACCTTGCTTTTAGAAGACAAGAAATACTcaattgatgatgattatttggCACCAAGTTTCCTTCAATCAAATGAATTAGATTATGATAATGGTCTGGATAGTGATAATGACATGGTGAATGATAATGATGTATTTGTTGATTCATGTAAACTAGATCTTAAAGCGGATGGTACAAAGTTTAACGAGGAATATGCAGAAATGGTGCCAATATCTGTGTCAGAAGCGAGAGCAGTGCTTGAAGTCAAAAAGATGTTTAAGACAGGACCTCATAAATGTAAGGGATGTGGACTATCATTTAAGATAAAGAAGTACTTAAAAATACATTCAAGAATGCATGATATGCATCTGAAAGGCAACTACCGCTGTGAACTGTGCAACTATTTCTACAAAACTCAGTTCCTCCTCGACTGCCACATGACTGAGAAACACATGTACAAGTATGTCTGTAGGATGTGCCCTGAAGTTAGTTTTGATCGAGCGTCAGCAAAAACACATTACTGCCTGCGCCACCTCGGTGGTCGGAATTGGGAGGGGCAAGCGCGACCAATGTGGCTTAAACCGAAGAAGGAAATCAAGCCTAAAGGGAAACGTAACACCGCCATACCCATACCAAAGGAGGCCTTCTCTATTGAGCTTATCAAACCAGAGGAGCAGTATTCTATGATAAAGgaacGCAAGACTGGTCGTAACTATTTAGAGGCGAAATACAAATGTGAATTCTGCTATAGGGGATACAGACTTTTGACGACGTACAGCAATCATATGGTGAAACACAACTCGTCAATATCCGGCAACCTCCAATGCGACATGTGCAAGCTATACTTCAGGGACCAGCGCAAGATGTACAAACACATGAACATGTGCCATCTTTACAAGTTTAGCTGTCAGTGTTGTGAGGCGGTGTTCACTTGTAGGAGTCAGGCATTAGCGCATTACAAGTGGCACAAGAATGTTACGTATGACTGCGAGCATTGTGACAAGAAGTTTGTCAAGGCTTCTACCAGACTGACCCACATACGCCTAAAACACCCGTCCACGTTTGTGTGCAATCTCTGCGGACATAGCTTCGTGAGCTCTGCTGGACTCACCTGTCATAAGCAGCTCACGCATTCTAAGGAGGAAGTAACAAACGCAGAAGGTGAATTCGACCCTTCCAACCCTAACTTCTGTGAAGACTGCAATATTGTGTTCGCTAACGAGCAGGCTTTTATGACGCATCTCGGCAGCTCTAAGAAACATGTCAAGACCAATATATCTGTtcAAAAAACCCAGCGCGACTCCCGCAAGCGAATGCGCCGCGAGATGGGCTCAAGTGCGCGCGAGCCTCGGCAGCCGGGTTCATCTTCGTCACCGGAGAAACGCGGCCGAAACGGCACTTCTGAAGTACTCAACACTGGAGTCACTACGGCTAATAACTGTGAGATGTGCGGCAAGTTCCTTGTGAACGACGTGCAAGCCCGGAGACACTACGAGGCCGAGCACCCGGGGGCGGACTTCCTGCGGCGGTACATGTGCGAGATCTGTGGACATACCGCCAGGcaATACGCGAATCTACTGGTTCACATGCGAACTCACACCAACGAGAAGCCATACGGATGCCCGCACTGCGACAGAAGGTTTAGCATGCTCAGCAACAGAGATAGGCACCTTGTGGTCCACACGGGTGAAAAACGCTTCCAATGCCAGCACTGCAACCGTCGCTTTACACAGAGCAGCGCGGTGAAGCTTCACATACAAACAGTCCATCTGAAGATACCCTACGCGCCGTGGGACAAGAAGAATAGGAAACGGCGGAAAGAGTTGGAGGCGGCGGGGGTTTCATCAGATATAAACTTGGTTGAAGCGCCGCCGATGCCTATAATGCAGCCGGCGCAACCGAAACTACTGCTCGATCCACAAGCTGAGTTCATTACTTACAGTGCCTGTATCACTTTCACTGACGAATGA
- Protein Sequence
- MWDVKVCAVCLSTSIKLYSLNSGNLRHEFNCVSGLKTSTGSGLPDYLCVECLAYVKKFMRYRQRCHRAHYILKQLLNSNKEIKEFHLTSIDREKLGVLSPLSLIDKSQFHYETHIYQWPATDFSSTNQARTNYNVPILHYSTLSKEETFEDVMTTSTAYKNDRIVKVEPDNKTDLKKTRRKKKHEPKALKTDITLLLEDKKYSIDDDYLAPSFLQSNELDYDNGLDSDNDMVNDNDVFVDSCKLDLKADGTKFNEEYAEMVPISVSEARAVLEVKKMFKTGPHKCKGCGLSFKIKKYLKIHSRMHDMHLKGNYRCELCNYFYKTQFLLDCHMTEKHMYKYVCRMCPEVSFDRASAKTHYCLRHLGGRNWEGQARPMWLKPKKEIKPKGKRNTAIPIPKEAFSIELIKPEEQYSMIKERKTGRNYLEAKYKCEFCYRGYRLLTTYSNHMVKHNSSISGNLQCDMCKLYFRDQRKMYKHMNMCHLYKFSCQCCEAVFTCRSQALAHYKWHKNVTYDCEHCDKKFVKASTRLTHIRLKHPSTFVCNLCGHSFVSSAGLTCHKQLTHSKEEVTNAEGEFDPSNPNFCEDCNIVFANEQAFMTHLGSSKKHVKTNISVQKTQRDSRKRMRREMGSSAREPRQPGSSSSPEKRGRNGTSEVLNTGVTTANNCEMCGKFLVNDVQARRHYEAEHPGADFLRRYMCEICGHTARQYANLLVHMRTHTNEKPYGCPHCDRRFSMLSNRDRHLVVHTGEKRFQCQHCNRRFTQSSAVKLHIQTVHLKIPYAPWDKKNRKRRKELEAAGVSSDINLVEAPPMPIMQPAQPKLLLDPQAEFITYSACITFTDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00705442; iTF_01161794; iTF_00706439; iTF_00698703; iTF_00696846; iTF_00697753; iTF_00700511; iTF_00699585; iTF_00703420; iTF_00704434;
- 90% Identity
- iTF_00698703; iTF_00696846;
- 80% Identity
- -