Eins010786.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402015.1:5553277-5569238[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00018 0.012 16.5 3.6 1 23 287 309 287 309 0.98 2 11 1.2 78 4.4 1.2 1 23 344 367 344 367 0.94 3 11 0.15 9.9 7.3 2.3 1 23 433 455 433 455 0.98 4 11 0.013 0.88 10.6 4.4 2 23 464 486 463 486 0.96 5 11 0.00058 0.038 14.9 2.5 1 23 517 540 517 540 0.96 6 11 0.013 0.85 10.6 2.3 1 23 544 567 544 567 0.93 7 11 0.048 3.1 8.8 0.0 3 20 587 604 586 606 0.94 8 11 0.55 36 5.5 0.1 3 23 670 691 669 691 0.89 9 11 1.9e-05 0.0012 19.5 0.6 1 23 700 722 700 722 0.98 10 11 0.0027 0.17 12.8 1.1 3 23 730 750 728 750 0.96 11 11 8.4e-06 0.00055 20.7 2.7 1 23 756 779 756 779 0.98
Sequence Information
- Coding Sequence
- ATGTGGGACGTGAAAGCCTGTGCTGTGTGTCTCAGCACCAGCAATAAGCTTTACAGCTTGAACTCCGGCAATTTACGCCATGAATTCAACTGTGTTTCCGGGCTGAAGACTTCCAATGGTAGTGGTTTGCCTGATTACCTGTGTGTAGAATGCCTTGCTTATGTAAAGAAATTCATGAGATATAGGCAAAGATGCCATCGGGCATATTACACCTTGAAACAACTACTGAATAGCAATAAAGAGATAAAGGAGTTCCACCTGACCTCAATAGACAAAAAGAAACTAGGTGTCTTGTCACCTCTGTCATTCATTGATCGATCCCATTTTCACTACGAAACTCACATTTACCAGTGGCCCGAAACAGACTTCAGTTCAACCAATCAGCCAAGAACAAGCTTCAAAATACCGATTCTACATTATAGTACATTATCTAAAGAAGAAACTTTTGAAGATGTCATGACTAACACTACTGTTTATGAGAAAGAGATAACTGTGAAAGTTGAGTCTGACACTAAAGCAGATTTAAAAAAAACCAGGAGAAAGAAAAAACATGAACCTAAAGCTTTAAAAACTGATATAACCTCGCTTTTAGAAGACAAGAAATACTCAATTGATGATGATTATTTAGCATCTAGTTTTCTTCAATCAAATGATTTAGATTATGATAATTGTGTGGATAATGATAATGGTCTGGATAATGATATGGTTCATGATAATGATGTATTTGTTGATTCATGTAAATTAGATCTTAAAGCTGATGGTACAAAGTTTAATGAGGAATACGCGGAAATGGTACCCATATCCGTGTCAGAAGCGAGAGCAGTGCTCGAAGTCAAAAAGATGTTTAAGACAGGACCTCATAAGTGTAAGGGCTGTGGACTATCATTTAAAATAAAGAAGTACTTAAAAATCCATTCAAGAATGCATGATATGCATCTTAAAGGCAACTACCACTGTGAACTTTGCAACTTTTACTACAAAACTCAGTTCCTTCTCGACTGTCACATGACTGAGAAACACATGTACAAGTATGTGTGTAGGATGTGTCCGGAAGTTAGTTTCGATCGAGCATCAGCAAAAACACATTACTGCCTCCGCCACCTCGGCGGTCGGAATTGGGAAGGACAAGCGCGACCAATGTGGCTTAAACCGAAGAAGGAAATCAAGCCTAAAGGGAAACGCAACACCGCCATACCTATACCAAAGGAGTCCTTCTCCATTGAGCTTATTAAACCAGAGGAGCAGTATTCTATGATAAGGGATCGCAAGACCAGTCGTAATTATTTAGAAGCAAAATACAAATGTGAATTCTGCTATAGAGGATACAGACTTTTGACGACGTACAGCAACCATATGGTGAAACACAACTCGTCAATATCCGGCAACCTCCAATGTGACATGTGCAAGCTGTACTTCAGGGACCAGCGCAAGATGTACAAACACATGAATATGTGCCACTTATACAAGTTCAGCTGTCAGTGTTGTGAGTCGGTGTTCACTTGTAGGAGTCAAGCCTTAGCGCATTACAAGTGGCACAAGAATGTTACGTACGACTGCGAGCATTGTGATAAGAAGTTTGTCAAGGCCTCAACCAGACTGACCCATATTCGCCTAAAGCACCCATCCACGTTTGTTTGCAATCTCTGCGGACATAGCTTTGTGAGTTCTGCTGGGCTAACCTGTCATAAACAGATCACGCATTCTAAGGAGGAAGTAACACACGCAGAAGGTGAAGTGGACCCATCTAACCCTAACTTCTGCGAAGACTGCAATATTGTGTTCGCTAACGAGCAGGCTTTTATGACGCATCTCGGCAGCTCTAAGAGACATGTCAAGACCAATATATCTGTTCAAAAAACCCAGCGCGACTCCCGCAAGCGAATGCGACGCGAGATGGGGTCAAGTCCGCGCGAGCCTCGGCAGCCGGGCTCATCGTCGTCGCTGGAGAAACGCGGCCGAAACGGCACTTCTGAAGTACTGAACACTGGAGTCACTACGGCCAATAACTGTGAGATGTGTGGCAAGTTCCTTGTGAACGACGTGCAAGCGCGGAGACACTACGAGGCCGAGCACCCGGGGGCTGACTTCCTGCGACGGTACATGTGCGAGGTCTGCGGACATACTGCCAGGCAATACGCCAATCTACTGGTTCACATGCGAACTCACACAAACGAGAAGCCGTACGGATGTCCGCACTGCGATAGAAGGTTTAGCATGCTCAGCAATAGAGATAGACATCTTGTGGTCCACACGGGTGAAAAACGCTTCCAATGCCAACACTGCAACCGCCGCTTCACACAGAGCAGTGCGGTGAAGCTCCACATACAAACTGTACATCTGAAGATACCCTACGCGCCTTGGGACAAGAAAAATAGGAAACGACGGAAAGAATTAGAAGCGGCGGGAGTTTCATCAGATATAAACTTGGTAGAAGCGCCGCCGATGCCCATAATGCAGCCGCCGCAACCGAAAATACTTCTCGACCCACAAGCTGAGTTTATAGCTTACAGTGCCTGTATCACTTTCACTGACGAATGA
- Protein Sequence
- MWDVKACAVCLSTSNKLYSLNSGNLRHEFNCVSGLKTSNGSGLPDYLCVECLAYVKKFMRYRQRCHRAYYTLKQLLNSNKEIKEFHLTSIDKKKLGVLSPLSFIDRSHFHYETHIYQWPETDFSSTNQPRTSFKIPILHYSTLSKEETFEDVMTNTTVYEKEITVKVESDTKADLKKTRRKKKHEPKALKTDITSLLEDKKYSIDDDYLASSFLQSNDLDYDNCVDNDNGLDNDMVHDNDVFVDSCKLDLKADGTKFNEEYAEMVPISVSEARAVLEVKKMFKTGPHKCKGCGLSFKIKKYLKIHSRMHDMHLKGNYHCELCNFYYKTQFLLDCHMTEKHMYKYVCRMCPEVSFDRASAKTHYCLRHLGGRNWEGQARPMWLKPKKEIKPKGKRNTAIPIPKESFSIELIKPEEQYSMIRDRKTSRNYLEAKYKCEFCYRGYRLLTTYSNHMVKHNSSISGNLQCDMCKLYFRDQRKMYKHMNMCHLYKFSCQCCESVFTCRSQALAHYKWHKNVTYDCEHCDKKFVKASTRLTHIRLKHPSTFVCNLCGHSFVSSAGLTCHKQITHSKEEVTHAEGEVDPSNPNFCEDCNIVFANEQAFMTHLGSSKRHVKTNISVQKTQRDSRKRMRREMGSSPREPRQPGSSSSLEKRGRNGTSEVLNTGVTTANNCEMCGKFLVNDVQARRHYEAEHPGADFLRRYMCEVCGHTARQYANLLVHMRTHTNEKPYGCPHCDRRFSMLSNRDRHLVVHTGEKRFQCQHCNRRFTQSSAVKLHIQTVHLKIPYAPWDKKNRKRRKELEAAGVSSDINLVEAPPMPIMQPPQPKILLDPQAEFIAYSACITFTDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00701451;
- 90% Identity
- iTF_00699585;
- 80% Identity
- -