Basic Information

Insect: Eupithecia insigniata
Gene Symbol: -
Assembly: GCA_947859395.1
Location: OX402008.1:741061-754720[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00031 2.5 8.7 0.1 23 44 201 222 197 231 0.89

2 11 0.018 1.4e+02 3.1 0.3 26 46 232 252 224 255 0.89

3 11 0.048 3.8e+02 1.7 0.1 22 52 256 286 253 288 0.88

4 11 7.1e-08 0.00057 20.4 0.0 19 52 309 342 294 343 0.85

5 11 0.0069 55 4.4 0.1 21 48 339 366 337 371 0.77

6 11 0.091 7.3e+02 0.8 0.0 21 43 367 389 364 395 0.82

7 11 0.00011 0.85 10.2 0.2 18 35 392 409 389 421 0.79

8 11 0.63 5.1e+03 -1.9 0.1 26 45 456 475 443 483 0.76

9 11 0.8 6.4e+03 -2.2 0.0 21 32 479 490 474 511 0.75

10 11 0.23 1.8e+03 -0.5 0.1 19 34 505 520 489 534 0.73

11 11 0.00015 1.2 9.8 0.0 21 51 535 565 518 566 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00031	2.5	8.7	0.1	23	44	201	222	197	231	0.89
2	11	0.018	1.4e+02	3.1	0.3	26	46	232	252	224	255	0.89
3	11	0.048	3.8e+02	1.7	0.1	22	52	256	286	253	288	0.88
4	11	7.1e-08	0.00057	20.4	0.0	19	52	309	342	294	343	0.85
5	11	0.0069	55	4.4	0.1	21	48	339	366	337	371	0.77
6	11	0.091	7.3e+02	0.8	0.0	21	43	367	389	364	395	0.82
7	11	0.00011	0.85	10.2	0.2	18	35	392	409	389	421	0.79
8	11	0.63	5.1e+03	-1.9	0.1	26	45	456	475	443	483	0.76
9	11	0.8	6.4e+03	-2.2	0.0	21	32	479	490	474	511	0.75
10	11	0.23	1.8e+03	-0.5	0.1	19	34	505	520	489	534	0.73
11	11	0.00015	1.2	9.8	0.0	21	51	535	565	518	566	0.89

Sequence Information

Coding Sequence: ATGATGAAGGTGGAGGAAAACAGCTTAGTGCGAGTGGACGATATAATATATCCACCAGATAAGGAAGATATTGCATGCGCTGTCCGTCTGCTTGTCCTGAAGTGGAAGCTCGTCTCAGGAGACAACAGACCCAGCACAGTGTGCTACATGTGCGACGCGCAGTTACTAAGATGCTGGAGGTTCTTCGACATGTGCCAGAAGTCGGACAAAATATGCACAGACCTGTATCAAACCGACGTGGAGGTGACACAGGAGAGTTTGGCTAAGCACAACCTGGGATGGATATACAACTACTCCACAACACCAGTGAAATCGGAGGCAGACATTGAAGAGATTGAAATCACTGTTAAACAAGAAATCACAGCTAAAGAAGAAGACACTTCTGATGATGAATACCTAATGCCCGTGTACGCTGAACAAATCAAAAGTGATGACAAATGCAATGTGCCTCGAATTAAAGAAAGTACTAATGATGTTAACACTGCATCTACACGCATTAATGGAAATCGTAATAAAAAGGATATTAAAAAATTAAAATGTGATAAAACTAAAATCAAAATAAAAGAAGAAATTGTACTCAATAGGGAAATACGATTACGAAAGCCATATACATGTCCTATATGTAACAGTGCTTTCGATAAGAAGCCTCTGCTACGCAAACACATGGCGACCcacactgacaaaacctctcgtgcttgcaaagtttgtaacaaagtattcatctatagtgtttgtctgaggaaacacatgaaaattcatacagaggagaggcaatatacttgcagtgtgtgtggcaaatcctactgtatgaaacaaggcttaaagaatcacatgaatatacacactggagcaaaaccgtatacatgcaatgtgtgcgaaaaatcattctctagtccttcaactttaataaaacacaagacaatacacacgggtgagagaccatactcttgtgatgtatgctataaaaaattcaggcaaagtggtgatttgagtagacatatgaaattgcatactggagaaaaaccattcacttgcaacatttgcaacaagtcatttattaagagatatttattaaaaaatcatatgaatatacacactggagaaaagccttataattgcggagtttgcaacaaggctttcaggaataacaacacgttggtattccacactgtacggcatgctggtgaaaagccttacacatgtcctatatgtcaaagtgtctttgatcttaagcctcttttactcaaacatattgcgacccacaccgacaactcctcatatgtgtgcaaagtttgtagcaaagtttttgttcataatattcttttgaagcaacatgagagaattcacatggatacaagacgttttacttgcaatgtgtgtggcaaaaccttctgcaggagtatgggcctaatcaatcacatgaaaacacacaccggagaaaagccctataagtgtaatgtatgtgataagtcatttcctcgtaaggagacattagaggcacacagaaggatacacacgggtgagaaaccatactcgtgtgatgtatgcaataagagatttactttcaatcacggcctaaacacacatattaaaatacacactggagaaaagccattcagttgcagcatctgcaacatgtcatttattggaggtcataaattgagaagacatttgaaagtacacagcaaagaaaagccttaG
Protein Sequence: MMKVEENSLVRVDDIIYPPDKEDIACAVRLLVLKWKLVSGDNRPSTVCYMCDAQLLRCWRFFDMCQKSDKICTDLYQTDVEVTQESLAKHNLGWIYNYSTTPVKSEADIEEIEITVKQEITAKEEDTSDDEYLMPVYAEQIKSDDKCNVPRIKESTNDVNTASTRINGNRNKKDIKKLKCDKTKIKIKEEIVLNREIRLRKPYTCPICNSAFDKKPLLRKHMATHTDKTSRACKVCNKVFIYSVCLRKHMKIHTEERQYTCSVCGKSYCMKQGLKNHMNIHTGAKPYTCNVCEKSFSSPSTLIKHKTIHTGERPYSCDVCYKKFRQSGDLSRHMKLHTGEKPFTCNICNKSFIKRYLLKNHMNIHTGEKPYNCGVCNKAFRNNNTLVFHTVRHAGEKPYTCPICQSVFDLKPLLLKHIATHTDNSSYVCKVCSKVFVHNILLKQHERIHMDTRRFTCNVCGKTFCRSMGLINHMKTHTGEKPYKCNVCDKSFPRKETLEAHRRIHTGEKPYSCDVCNKRFTFNHGLNTHIKIHTGEKPFSCSICNMSFIGGHKLRRHLKVHSKEKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698837;
90% Identity: iTF_00700317;
80% Identity: iTF_00700317;