Eins023862.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402021.1:6140548-6143480[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.75 49 5.1 0.2 1 23 53 75 53 75 0.96 2 17 0.54 35 5.5 0.1 2 23 104 126 103 126 0.94 3 17 0.012 0.79 10.7 1.1 3 23 153 173 151 173 0.96 4 17 0.0055 0.36 11.8 1.0 1 23 177 200 177 200 0.95 5 17 0.024 1.5 9.8 2.0 1 22 204 225 204 225 0.95 6 17 0.0002 0.013 16.3 0.8 1 23 232 255 232 255 0.95 7 17 0.035 2.3 9.3 1.2 1 16 262 277 262 279 0.90 8 17 0.41 27 5.9 1.3 3 23 309 329 307 329 0.93 9 17 4.3 2.8e+02 2.7 0.1 2 23 358 380 357 380 0.82 10 17 0.36 24 6.1 0.5 2 20 406 424 405 427 0.91 11 17 0.016 1 10.4 0.2 1 23 431 454 431 454 0.94 12 17 0.83 54 4.9 1.1 1 22 458 479 458 479 0.94 13 17 0.069 4.5 8.3 3.0 1 23 486 509 482 509 0.89 14 17 0.096 6.3 7.9 0.4 1 23 516 539 516 539 0.87 15 17 0.26 17 6.5 2.6 2 23 545 566 544 566 0.95 16 17 0.00013 0.0083 16.9 0.6 1 20 572 591 572 594 0.94 17 17 8.4e-05 0.0055 17.5 1.1 1 23 600 623 600 623 0.97
Sequence Information
- Coding Sequence
- ATGAATACCGTTCACCTGTTACAATTGCGGGGGATAGTCTCCTCGTGGGAGATGATGATCAAACATATGACCAAACTCAGAGCAATCGCGAGGAGGAATGCTGAGATCGTTTTAAAGTATTCGACAGTGTACCCGTTCAGGTTGCAAGGAAAAATCTTTATATGTGTGTACTGCTGCGAAGAATTTGTAGGTGCCGATGAGTACAGAATCCACTTGGACTCACATCGTAATGTTAACGTGTCCACTGCCTTCGGTCACCTTGGAGGGGCTAGATGTAGAGAATACCTCAAGGTGGACTGCGTAAACCTCAAATGCAGGCTGTGTAACGAGCCGTTCGATGCCCTCTTTGATATAGCTCAACATCTCAAATCTGAACATGAGGACGCGGCGAAAAGCCTCAACTTAGACAGTGAATTAGGGCTGCATCCCTATAGATTGTTGAAAGACAGGTGGAACTGCATGGTGTGTCACCAGAAGCTGCCGAGTTTGACAACGCTTGTGAGGCACATGTCGACTCATTATGCGGACTATTTTTGCGATATCTGCGGTAAAGGCTATCTGAACCATCAGAACTTGAATCTCCACGTCAAATACGCCCACTCGACGAAGCACATGTGCAGGAAATGCAAGAAAGAATTCCCTACACTGGACGAAAAGAAGGAACACCAAAAAACATCTACGAAATGCATGCAGTTTGCCTGTGTCCATTGCGGGGAGAGATTCTCCTCTTGGGAGATGAAGATTAAACATATGACCAGCGAGCATAACGTTGATGCGCCTCAGTATCCTTGCACCGATTGCAAGATCGTCTTCTCCAATAGGAAAAGTTTCTATAAACTCAAAGCAATCGCGAAAAGGAATGCTGAGATCGTGTTGAGGTATTCGACAGTGTTTCCGTTCAGGTTGCAAGGACATAACTTGATATGTGTTTACTGCTGCGAAGTATTTGAAGATCCCGACGAGTACAGGCACCATTTTGACTCGCATCCTAATGTAAACGTGTCTACTGCCTTCGCGCATCTCAAAGGCGCTACAGGTCGAGAATACCTCAAAGTTGACTGCGTCAACCTGAAATGCAGGCTGTGTAACGAGCCGTTCGATGCCATCCCTGATGTAGCTCAGCATCTCAAATTTTATCATGAGGACGTAGCTGATAGCCTCAACTTAGACTGTGATGTAGGAATGCATCCTTATAGATTGTTAAAAGACAAATGGACGTGTATGTTGTGCCACATGAAACTGCCGAGCTTGACAACGCTTGCGAGGCACATGCCGTCTCATTATGCGGACTATGTTTGCGATGTCTGCGGTAGAGGCTATCTGAACATAACAAATTTGAAAATCCACGTCAAATTCACCCACTCGGAGAAACACATCTGCAGGAAATGCATGAAAGAATTCGCCACAGCGAAAGAAAAGAAGGAGCACCTAAAAACATCTACGAAATGCATGCAGTTTGCGTGTATCCATTGTGGGGAGAGATTCTCCTCTTGGGAGATGAAGATCAAACATTTAACTAGTAAGCATAACGTTAAGGCGTCTAAGTACCCATGCACCGATTGCGAGCTCGTCTTTCCCACCCGGAAAATTTTCTACAACCATTACTTTGTAGCGCACACTGACCAAGCGCTCAAGTGCTCCTGCTGTGACAAGAAGTTTTTAAATAAAACTCTACTCGAAGACCATCTGGTCACTCACACTAACGAGAAGCCGTTTGAATGCTCTGTCTGTTCCAAGTTATTTACGAGGAACAAAGCGCTGCGTCAGCACATGTGGATCCATAGTGAAAAGAAGAGGTTTACTTGTGTTTTATGCGATAGGTCATTCAATCAGAAAGTCGGTTACTTATCTCATATGAAAAGTACACATCCTAATACGTCGATATAA
- Protein Sequence
- MNTVHLLQLRGIVSSWEMMIKHMTKLRAIARRNAEIVLKYSTVYPFRLQGKIFICVYCCEEFVGADEYRIHLDSHRNVNVSTAFGHLGGARCREYLKVDCVNLKCRLCNEPFDALFDIAQHLKSEHEDAAKSLNLDSELGLHPYRLLKDRWNCMVCHQKLPSLTTLVRHMSTHYADYFCDICGKGYLNHQNLNLHVKYAHSTKHMCRKCKKEFPTLDEKKEHQKTSTKCMQFACVHCGERFSSWEMKIKHMTSEHNVDAPQYPCTDCKIVFSNRKSFYKLKAIAKRNAEIVLRYSTVFPFRLQGHNLICVYCCEVFEDPDEYRHHFDSHPNVNVSTAFAHLKGATGREYLKVDCVNLKCRLCNEPFDAIPDVAQHLKFYHEDVADSLNLDCDVGMHPYRLLKDKWTCMLCHMKLPSLTTLARHMPSHYADYVCDVCGRGYLNITNLKIHVKFTHSEKHICRKCMKEFATAKEKKEHLKTSTKCMQFACIHCGERFSSWEMKIKHLTSKHNVKASKYPCTDCELVFPTRKIFYNHYFVAHTDQALKCSCCDKKFLNKTLLEDHLVTHTNEKPFECSVCSKLFTRNKALRQHMWIHSEKKRFTCVLCDRSFNQKVGYLSHMKSTHPNTSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00703313;
- 90% Identity
- iTF_00701374;
- 80% Identity
- -