Basic Information

Gene Symbol
kn
Assembly
GCA_947859395.1
Location
OX402006.1:9951492-9960996[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-118 1.3e-114 384.0 0.0 209 387 74 270 71 274 0.98
2 2 2.2e-08 0.00018 20.4 3.7 421 469 280 330 271 384 0.78

Sequence Information

Coding Sequence
ATGGCGTCTCCAACAGCAACGTTCCATTTATCACTCCAATATTTAGTTCTAAAAAGCCGCTATCGATCGAAGGCCGTCAATCGCCCACCCACACACGCGGTGCATTTTCTTGCATACCTATTGGGTTCCGTCGTCCGTCCATTTGGAATCCCGAGACGTGGCTCCACCTCCCTGGGGACTCTCCCTTTTGGCTTCCCTTCGCTGTGTGGAATATGTCTGAATGTAGTGATATCAACGCAAGTAATGGTCGACGGCCCTCTACTGGCGATATCGGACAACATGTTCGTTCACAACAACAGCAAGCACGGCCGCAGGGCGAAACGGCTCGACCCTACTGAAGGTATTGACGCCGCGCCAGACAACACTTCGGGTCTATACCCGCCCCTACCAGTGGCGACGCCGTGCATAAAAGCAATATCGCCGAGTGAAGGCTGGACATCCGGAGGCTCGACGGTTATCATAGTAGGGGACAACTTCTTCGATGGACTACAAGTTGTTTTCGGGACCATGCTTGTTTGGAGCGAGCTAATAACGTCGCACGCGATACGAGTGCAAACTCCTCCACGGCACATACCGGGCGTCGTGGAAGTCACATTGTCGTACAAAAGCAAACAGTTCTGCAAGGGAGCACCGGGACGATTTGTCTATGTTTCAGCGCTGAACGAGCCTACGATAGATTACGGATTTCAGCGGCTCCAGAAACTTATACCGAGGCATCCTGGTGACCCGGAGAAATTACCAAAGGAAATAATTCTAAAACGAGCAGCGGATCTAGCCGAAGCGCTGTACTCTATGCCTCGCAACAACCAGTTAGGTCTGGGCGGGCCTCGGTCGCCCACCTCCAGTATGTCTTTCAACTCTTACACGGGCCAACTGGCTGTCAGTGTGCAGGATACTGCGGCTTCGCAGTGGACTGAAGAGGAGTATGCCCGTAGCGGTGGATCTGTGTCGCCGAGGTATTGCTCCGCTGCATCTACTCCACATGCCGCACCCGCGTCCTACCCGCATCCGCAACACTACCCCGCGCCTCCTACCTCGCTCTTCAATACTACCTCACGAATGGGCGGCCTAGTATCATCGCCGTTTAGCGTAAATCCCTTTTCTCTACCAACTTGCAGCGCCCAGCAGTACGCCCAAACAGCGCCTCTAGCCTCCAAGTAG
Protein Sequence
MASPTATFHLSLQYLVLKSRYRSKAVNRPPTHAVHFLAYLLGSVVRPFGIPRRGSTSLGTLPFGFPSLCGICLNVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPTSSMSFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2