Basic Information

Gene Symbol
kn
Assembly
GCA_955876795.1
Location
OY041611.1:10541672-10555806[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.5e-142 1.1e-137 460.8 0.0 182 387 17 240 13 244 0.99
2 2 4.9e-08 0.00056 19.2 5.3 421 470 250 301 241 355 0.73

Sequence Information

Coding Sequence
ATGAGAATTGCGAATAATCCTGTTTATGCTACATTTTATACGCCAACCACATTTTTCCTTAAATTCTTCCTGAAGTGCAATCAGAACTGTCTGAAAAACGCCGGGAATCCTCGGGATATGAGAAGGTTTCAAGTGGTGATATCAACGCAAGTGATGGTCGACGGCCCTCTGCTGGCGATATCGGACAACATGTTTGTTCACAACAACAGCAAGCACGGCCGCAGGGCGAAACGGCTCGACCCTACTGAAGGTATTGACGCCGCGGCTGACAACACTTCGGGTCTATACCCGCCCCTACCAGTGGCGACGCCGTGCATAAAAGCGATATCGCCGAGTGAAGGCTGGACGTCTGGAGGCTCGACGGTTATCATAGTAGGGGACAATTTCTTCGATGGACTACAAGTTGTGTTCGGGACCATGCTTGTTTGGAGCGAGCTCATAACGTCTCACGCGATACGAGTGCAAACGCCTCCGCGGCACATACCGGGCGTCGTGGAAGTCACATTGTCGTACAAAAGCAAGCAGTTCTGCAAGGGAGCGCCGGGGCGATTTGTCTATGTTTCAGCGCTGAACGAGCCTACGATAGATTACGGATTTCAGCGACTCCAGAAACTTATACCGAGGCATCCTGGAGACCCGGAGAAGTTACCTAAGGAAATAATCCTAAAACGAGCAGCGGACCTAGCCGAAGCCCTATACTCCATGCCTCGCAACAACCAGCTCGGCCTGGGCGGACCTCGGTCTCCCACCTCTAGTATGTCTTTCAACTCGTACACCGGACAACTCGCTGTCAGTGTACAGGATACTGCAGCTTCGCAGTGGACTGAAGAGGAGTATGCCCGTAGCGGTGGATCTGTGTCGCCGAGGTATTGTTCCGCTGCGTCGACTCCCCACGCTGCGCCCGCTTCCTACCCGCATCCACAACACTACCCAGCGCCTCCTACCTCGCTCTTCAACACTACCTCACGATCGGGCGGGCTTGTTTCATCGCCATTTAGCGTGAATCCCTTCTCTCTACCAACTTGCAGTGCCCAGCAGTACGCCCAAACGGCACCTCTAGCCTCCAAGTAG
Protein Sequence
MRIANNPVYATFYTPTTFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAADNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPTSSMSFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSRSGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2