Basic Information

Gene Symbol
kn
Assembly
GCA_958496255.1
Location
OY292459.1:11224164-11235313[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-16 1.6e-12 47.2 0.1 218 249 2 33 1 38 0.93
2 3 1.8e-114 2.7e-110 370.1 0.1 199 387 35 258 33 261 0.94
3 3 3.4e-09 4.8e-05 22.5 1.0 421 468 267 316 260 323 0.86

Sequence Information

Coding Sequence
ATGGTCGACGGTCCTCTCCTAGCGATATCAGACAACATGTTCGTCCACAATAACAGCAAACACGGCCGCAGGGCAAAGCGGCTCGATCCCACTGAAGGTACTGAAGGCGCGCCCGACAACACTTGTACGTTTTtgGTGGTAATATCAACGCAAGTGATGGTCGACGGTCCTCTCCTAGCGATATCAGACAACATGTTCGTCCACAATAACAGCAAACACGGCCGCAGGGCAAAGCGGCTCGATCCCACTGAAGGTACTGAAGGCGCGCCCGACAACACTTCGGGTCTATACCCTCCCCTACCTGTGGCAACTCCTTGTATAAAGGCGATATCACCGAGCGAAGGTTGGACGTCAGGAGGCTCGACGGTTATCATAGTAGGGGACAACTTCTTCGATGGACTACAAGTTGTGTTCGGGACCATGCTTGTTTGGAGTGAGTTAATAACATCTCACGCGATAAGAGTACAGACACCTCCCCGGCACATACCTGGAGTGGTGGAGGTCACTCTCTCCTACAAAAGCAAGCAGTTCTGCAAGGGAgctcccggaagatttgtctaTGTTTTCGTTCTGTTAGTGGAGCTAATGATTGATTTTGTTTATCCGTTTCGCATAGCAGCGCTCAACGAACCAACGATAGATTACGGCTTTCAACGCCTGCAGAAGCTCATACCAAGGCATCCTGGAGACCCGGAAAAACTACCCAAGGAAATTATCCTCAAACGGGCAGCGGACCTAGCAGAAGCACTTTACTCAATGCCCAGGAATAATCAACTCGGGCTCGGCGCGCCAAGATCACCTTCCAGCATGCCTTTCAACTCATACTCGGGCCAGCTGGCTGTCAGCGTACAAGACACGGCCGCCTCGCAATGGACGGAAGAGGAGTATGCGCGTAGCGGCGGGTCGGTCTCCCCGCGGTACTGCTCGGCCGCGTCTACGCCGCACGCCGCGCCCGCTGCCTACCCCCACCCGCAACACTACCCCGCGCCGCCCACTTCCCTCTTCAACACCACCTCACAGGAGTATGTAGAGGCAGGTCGGTGTCTCTGCGGTACTGCGCCGCACGCCTACCCACTGTACTACCCCGCACCGCCCACTTCCCTCTTCAACACCACCTCACGAATGGGTGGTCTAGTCTCGTCTCCGTTTAGTGTGAATCCCTTCTCCTTACCAACATGCAGCGCCCAGCAGTACGCACAAACCGCGCCTTTAGCCTCCAAGTAG
Protein Sequence
MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTEGAPDNTCTFLVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTEGAPDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVFVLLVELMIDFVYPFRIAALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPSSMPFNSYSGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSQEYVEAGRCLCGTAPHAYPLYYPAPPTSLFNTTSRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00699887;
90% Identity
-
80% Identity
-