Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352255.1:5907397-5910749[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00023 0.015 16.0 1.4 2 23 158 179 157 179 0.96

2 15 3.5e-05 0.0023 18.6 1.0 2 23 184 205 183 205 0.96

3 15 9.8e-06 0.00063 20.3 1.9 1 23 211 233 211 233 0.98

4 15 0.00031 0.02 15.6 0.3 1 23 238 260 238 260 0.97

5 15 5.3e-06 0.00034 21.2 0.2 1 23 266 288 266 288 0.98

6 15 9.2e-06 0.00059 20.4 0.4 1 23 294 316 294 316 0.97

7 15 1.4e-05 0.00092 19.8 1.8 1 23 322 344 322 344 0.96

8 15 4.8e-05 0.0031 18.2 0.3 1 23 349 371 349 371 0.97

9 15 0.019 1.2 10.0 0.8 1 23 377 399 377 399 0.97

10 15 0.00095 0.061 14.1 2.0 1 23 430 452 430 452 0.97

11 15 2.6e-06 0.00017 22.1 0.7 1 23 458 480 458 480 0.98

12 15 6.3e-07 4e-05 24.1 1.2 2 23 487 508 486 508 0.95

13 15 0.00019 0.012 16.2 4.5 1 23 514 537 514 537 0.95

14 15 3.8e-05 0.0025 18.5 3.4 1 23 543 565 543 565 0.98

15 15 0.00026 0.017 15.8 1.4 1 19 571 589 571 591 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00023	0.015	16.0	1.4	2	23	158	179	157	179	0.96
2	15	3.5e-05	0.0023	18.6	1.0	2	23	184	205	183	205	0.96
3	15	9.8e-06	0.00063	20.3	1.9	1	23	211	233	211	233	0.98
4	15	0.00031	0.02	15.6	0.3	1	23	238	260	238	260	0.97
5	15	5.3e-06	0.00034	21.2	0.2	1	23	266	288	266	288	0.98
6	15	9.2e-06	0.00059	20.4	0.4	1	23	294	316	294	316	0.97
7	15	1.4e-05	0.00092	19.8	1.8	1	23	322	344	322	344	0.96
8	15	4.8e-05	0.0031	18.2	0.3	1	23	349	371	349	371	0.97
9	15	0.019	1.2	10.0	0.8	1	23	377	399	377	399	0.97
10	15	0.00095	0.061	14.1	2.0	1	23	430	452	430	452	0.97
11	15	2.6e-06	0.00017	22.1	0.7	1	23	458	480	458	480	0.98
12	15	6.3e-07	4e-05	24.1	1.2	2	23	487	508	486	508	0.95
13	15	0.00019	0.012	16.2	4.5	1	23	514	537	514	537	0.95
14	15	3.8e-05	0.0025	18.5	3.4	1	23	543	565	543	565	0.98
15	15	0.00026	0.017	15.8	1.4	1	19	571	589	571	591	0.96

Sequence Information

Coding Sequence: ATGTCGTCTTCGCAATCATTAGCAGACGTCTGTCGAGTCTGCCTGGCGAGCGATATGAAGATCTTCACTATTGAAGATATCAGCCTATTGGAAATGTATGAGAAACTCACAAATGCCCAGCTGAACAGCACAGACGGGCGCCCGCGCGCAGTCTGCTTCATCTGCGTGTCTCAGCTGCAGCGTTGTCGGCGGCTCACCACCAGGGCACAACGCTCCGAGAAGTTCCTCAACGATCTATTGCTGACCAATCAGAAGGTTACAAAAGAAACAGTGGCAACTCTCAACATTTCTTCAAATCAAACCCTATCAATAACCACATTAGAATCAGTTTCCTACGACGGCTCAACAGATGGCGCGGACACAGAAATATCTATCAAAGAAGAATACTTCGACTATGACGAACCTAGCGAGGACATATTCACTAAAGTCGAAAAAGTCTCCGAAGAAATCAAGAAAGAGATTCTAAACCTTAACTGCAATGAATGCGACTTAAAATTCCATAGCAAGAAATTACTTATAGCGCACATAAAGTTACATAATAAAAGAACTTACTGCAAAAAGTGTAATAAGTCTTATTCGACCGTCAGTGCTTTGAAAGGCCATATGACTATTCACACAGGGGAAATGCCGTACGCCTGTCATTTGTGTAGCAGGACGTTTCGAAGGAAGCCATACTTAGAAGGTCATATCAGGATGCATACGGAAAAACCGTACTTCTGCAGTACTTGTAAACTTGGTTTCACAGAGGCTGATGGCTTGAAAAAACATATGGTAGTCCACGCTAAAGGCAGGCCTTTTATATGCAGCCAGTGTGGCATCGGCTTTCCCTACAAAAGCTCGTTAGATCGACACCAAAGAGTCCACACTGGTATAAAACCTTTTGATTGCAAAAAGTGTAAAAACTCCTTTGCTGACCAAAGCGGTCTGGCCAAGCACATGCTTATCCATGAAGGTTTAAAGCCATTTCCTTGCAATATGTGTGACTCGACTTTCAGACACGCGGCAAGCTTGAAAAGACATATGTATTTACATATCCAAAACCCATTTACTTGCAATGTGTGTGATATGACATTTGATGAGGAAAATGACTTGAATAAACATATGACAGCGCATGTAGGTGAGAAGCCATTTGTATGCGATAAATGCGAGTTGAAATTTGACATATACACGATGTTTAGGAAACATTTAGAGATACATGGTGAGAAGAAAGAGGAAAAACCTCTGCCTTCTTCTACGAGAATTATCCTCGATGCGTCTAGCGTCCGAAGTAAGCATAAGAAGAAAAAACACATATGCGATCTATGTAAAAAGGAGTTATTTAGTAACGCACACCTGATCCTTCACATGAGGATCCATAACGACGAACGACCTTTTCCCTGCGACGAATGCGAAAAAAAGTTTCGCACCAAAGCGGTATTACAAGCTCACAAGAGAACACATTCGGGAGAAAAAGTCTGCTCCTGCGAAATTTGCGGTAAATCCTTCTCGCAAACCGGGAGTTTGAACAAACACATGGTAATACACACAGGAGAATTACCCCACGCTTGCCATTTGTGTGAAAAGGCGTATAAACAGAGTTGCCAGCTCACAGCGCATATAAGGAATATCCATGATGGTATAAAGAGGTTTTCCTGTGATTTATGTAGTACGAGGTTCACAGCTAAAACTCATTTGAGAAGGCATATGAATATCCATGCAGGTATTAAACCTTTTTCGTGTTTGAAGTGTGGATTAAAATTCTCTACTCGAACTTCTTTGAAACGGCATTCTACTAATTCTTGTAAATAA
Protein Sequence: MSSSQSLADVCRVCLASDMKIFTIEDISLLEMYEKLTNAQLNSTDGRPRAVCFICVSQLQRCRRLTTRAQRSEKFLNDLLLTNQKVTKETVATLNISSNQTLSITTLESVSYDGSTDGADTEISIKEEYFDYDEPSEDIFTKVEKVSEEIKKEILNLNCNECDLKFHSKKLLIAHIKLHNKRTYCKKCNKSYSTVSALKGHMTIHTGEMPYACHLCSRTFRRKPYLEGHIRMHTEKPYFCSTCKLGFTEADGLKKHMVVHAKGRPFICSQCGIGFPYKSSLDRHQRVHTGIKPFDCKKCKNSFADQSGLAKHMLIHEGLKPFPCNMCDSTFRHAASLKRHMYLHIQNPFTCNVCDMTFDEENDLNKHMTAHVGEKPFVCDKCELKFDIYTMFRKHLEIHGEKKEEKPLPSSTRIILDASSVRSKHKKKKHICDLCKKELFSNAHLILHMRIHNDERPFPCDECEKKFRTKAVLQAHKRTHSGEKVCSCEICGKSFSQTGSLNKHMVIHTGELPHACHLCEKAYKQSCQLTAHIRNIHDGIKRFSCDLCSTRFTAKTHLRRHMNIHAGIKPFSCLKCGLKFSTRTSLKRHSTNSCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706278;
90% Identity: iTF_00705286; iTF_00700331; iTF_00703235; iTF_00702204;
80% Identity: -