Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: -
Assembly: GCA_963564075.1
Location: OY751125.1:8459036-8464648[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.9e-05 0.0064 17.7 1.8 1 23 156 178 156 178 0.98

2 15 2.4e-05 0.002 19.3 0.7 2 23 183 204 182 204 0.96

3 15 7.2e-05 0.0058 17.8 1.2 1 23 210 232 210 232 0.98

4 15 0.00036 0.03 15.6 0.3 1 23 237 259 237 259 0.97

5 15 6.2e-06 0.0005 21.2 0.2 1 23 265 287 265 287 0.98

6 15 5.9e-05 0.0047 18.1 0.6 3 23 295 315 293 315 0.97

7 15 0.0001 0.0084 17.3 1.2 1 23 321 343 321 343 0.96

8 15 6.3e-07 5.1e-05 24.3 0.6 1 23 348 370 348 370 0.98

9 15 0.022 1.8 10.0 0.8 1 23 376 398 376 398 0.97

10 15 1.1e-05 0.0009 20.4 1.7 1 23 429 451 429 451 0.97

11 15 9.1e-07 7.3e-05 23.8 0.9 1 23 457 479 457 479 0.98

12 15 8e-07 6.4e-05 24.0 1.3 2 23 486 507 485 507 0.95

13 15 0.00018 0.015 16.6 5.4 1 23 513 536 513 536 0.95

14 15 4.5e-05 0.0036 18.5 3.4 1 23 542 564 542 564 0.98

15 15 0.00031 0.025 15.8 1.4 1 19 570 588 570 590 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.9e-05	0.0064	17.7	1.8	1	23	156	178	156	178	0.98
2	15	2.4e-05	0.002	19.3	0.7	2	23	183	204	182	204	0.96
3	15	7.2e-05	0.0058	17.8	1.2	1	23	210	232	210	232	0.98
4	15	0.00036	0.03	15.6	0.3	1	23	237	259	237	259	0.97
5	15	6.2e-06	0.0005	21.2	0.2	1	23	265	287	265	287	0.98
6	15	5.9e-05	0.0047	18.1	0.6	3	23	295	315	293	315	0.97
7	15	0.0001	0.0084	17.3	1.2	1	23	321	343	321	343	0.96
8	15	6.3e-07	5.1e-05	24.3	0.6	1	23	348	370	348	370	0.98
9	15	0.022	1.8	10.0	0.8	1	23	376	398	376	398	0.97
10	15	1.1e-05	0.0009	20.4	1.7	1	23	429	451	429	451	0.97
11	15	9.1e-07	7.3e-05	23.8	0.9	1	23	457	479	457	479	0.98
12	15	8e-07	6.4e-05	24.0	1.3	2	23	486	507	485	507	0.95
13	15	0.00018	0.015	16.6	5.4	1	23	513	536	513	536	0.95
14	15	4.5e-05	0.0036	18.5	3.4	1	23	542	564	542	564	0.98
15	15	0.00031	0.025	15.8	1.4	1	19	570	588	570	590	0.96

Sequence Information

Coding Sequence: ATGTCGTCTTCGCAATCTTTAGCAGAGGTCTGTCGAGTCTGCCTGGCGAGCGACGTGAAGATCTACAATATTGAAGATATCCGCCTAGTGGAAATGTATGAGAAACTTACAAGTGCCCAGCTGCACAGCACAGATGGGCGCCCGCGTGCGGTCTGCTACATCTGTGTGACTCAGCTGCAGCGCTGTCGGAGGCTCACCACGCGGGCACAGCGCTCCGAGAAGTTCCTGAACGATCTGCTGCTGACCAACCAGAAGatAACAAAAGAAACTGTGGCAACTCTCAACATTTCTTCCAAACAAACCCTATCAATAACTATATTAGAATCCGTTTCCTACGACGGCTCAACAGATGGCACTGACACAGAAATATCTATCAAAGAAGAATACTCAGACTATGACGAACCTAGCGAAGAACTTTTTACAAAAGTCGAAAAAGTCTCCGAAGAAATCAAGAAAGAGGATTTATACAACTGCAACGACTGCAACTTAAAATTCCATGACAAGAAATTACTCATAGCTCACATAAAGCTACACAATAAAAGAACTTACTGCAAGAAATGTGATAAGTCATATTCCACCGTCAGTGCGTTGAAGGGACATATGACCATACATACAGGAGAGATGCCATACGCTTGTCATATATGCAACAGGACATTTCGACTAAGGGCATACTTGGACGGCCATATAAGAATGCACACAGAAAAGCCATACTTCTGCAGTACATGTAAACTAGGTTTTACAGAGGCGGATGGCTTGAAGAAACATATGGTGGTACACGCTAAAGGCAGACCTTTTATATGCAGCCAGTGTGGCATCGGCTTTCCATACAAAAGCTCGTTAGATCGACACCAAAGAGTCCACACTGGGATAAAACCTTATGGTTGCAAAAAGTGTAAGAACTCCTTCGTAGACCAAAGCGGTCTGAGCAAGCACATGCTGATCCATGAAGGTGTAAAACCTTTTATTTGCAATATATGTGAGTCTGAGTTCCGACACGCGGGCAGCTTGAAAAGACATATGTATTTGCACATCGAAAACCCTTTTTCTTGCAATGTGTGTGATAAGACTTTTgatgaagaaaataatttaaataaacatatGAGAGCGCATGTTGGCGAGAAGACATTCGTATGTGATAAATGCGAATTGAAATTCGACATATACACGATGTTTAGAAAACATTTAGAGATACATGGAGAGACGAATGAGGAGAAACCTCTACCTTCTTCTACGAGAATTATTCTCGATGCGTCTAGCGTCCGAAGTAAACGTAAGAAGAAAAAACATATATGCGAGTTATGTAAAAAAGAATTTATCAGTAATGCACACTTAATCCTCCACATGAGAATACATAATGATGAGCGACCGTTCCCCTGCGACgaatgcgataaaaagtttcgCACCAAAGCTGTACTAAAAGCTCACAAACGAACTCACACGGGAGAAAAAGTCTGTTCCTGCGAAATATGTGGTAAATCCTTCACGCAAACGGGGAGTTTGAACAAACACATGGTGATACACACGGGAGAATTACCCCACGCTTGTCATTTGTGTGATAAAGCGTATAAACAGAGTTGCCAGCTCACATCGCATATAAGGAACATCCATGATGGGATAAAGAGGTTTTCGTGTGATTTATGTAGTACTAGGTTTACAGCTAAAACGCATTTAAGAAGGCATATGAATATTCATGCTGGTATTAAACCTTTTTCGTGTTTGAAGTGCGGATTAAAGTTCTCTACTCGGACTTCTTTGAAGCGGCACTCGACGAATTCTTGTAAATAG
Protein Sequence: MSSSQSLAEVCRVCLASDVKIYNIEDIRLVEMYEKLTSAQLHSTDGRPRAVCYICVTQLQRCRRLTTRAQRSEKFLNDLLLTNQKITKETVATLNISSKQTLSITILESVSYDGSTDGTDTEISIKEEYSDYDEPSEELFTKVEKVSEEIKKEDLYNCNDCNLKFHDKKLLIAHIKLHNKRTYCKKCDKSYSTVSALKGHMTIHTGEMPYACHICNRTFRLRAYLDGHIRMHTEKPYFCSTCKLGFTEADGLKKHMVVHAKGRPFICSQCGIGFPYKSSLDRHQRVHTGIKPYGCKKCKNSFVDQSGLSKHMLIHEGVKPFICNICESEFRHAGSLKRHMYLHIENPFSCNVCDKTFDEENNLNKHMRAHVGEKTFVCDKCELKFDIYTMFRKHLEIHGETNEEKPLPSSTRIILDASSVRSKRKKKKHICELCKKEFISNAHLILHMRIHNDERPFPCDECDKKFRTKAVLKAHKRTHTGEKVCSCEICGKSFTQTGSLNKHMVIHTGELPHACHLCDKAYKQSCQLTSHIRNIHDGIKRFSCDLCSTRFTAKTHLRRHMNIHAGIKPFSCLKCGLKFSTRTSLKRHSTNSCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706278;
90% Identity: iTF_00699437;
80% Identity: -