Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000133.1:556780-560297[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.6e-06 0.0004 21.0 0.5 1 23 199 221 199 221 0.98

2 13 4e-06 0.00024 21.7 1.2 1 23 227 249 227 249 0.97

3 13 9.9e-07 6e-05 23.6 3.9 1 23 254 276 254 276 0.99

4 13 1.6e-05 0.00099 19.8 0.6 1 23 282 304 282 304 0.97

5 13 9.8e-06 0.0006 20.4 3.0 1 23 310 332 310 332 0.97

6 13 9e-06 0.00055 20.6 2.8 1 23 338 360 338 360 0.99

7 13 0.0002 0.012 16.3 0.4 1 23 366 388 366 388 0.96

8 13 0.0003 0.018 15.8 0.1 1 23 394 416 394 416 0.99

9 13 2.5e-05 0.0015 19.2 1.0 1 23 422 444 422 444 0.98

10 13 6.9e-07 4.2e-05 24.1 2.4 1 23 450 472 450 472 0.98

11 13 9.5e-08 5.8e-06 26.8 0.7 1 23 478 500 478 500 0.99

12 13 6.6e-05 0.004 17.8 5.6 1 23 506 528 506 528 0.98

13 13 0.00014 0.0086 16.8 0.6 1 23 534 556 534 556 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.6e-06	0.0004	21.0	0.5	1	23	199	221	199	221	0.98
2	13	4e-06	0.00024	21.7	1.2	1	23	227	249	227	249	0.97
3	13	9.9e-07	6e-05	23.6	3.9	1	23	254	276	254	276	0.99
4	13	1.6e-05	0.00099	19.8	0.6	1	23	282	304	282	304	0.97
5	13	9.8e-06	0.0006	20.4	3.0	1	23	310	332	310	332	0.97
6	13	9e-06	0.00055	20.6	2.8	1	23	338	360	338	360	0.99
7	13	0.0002	0.012	16.3	0.4	1	23	366	388	366	388	0.96
8	13	0.0003	0.018	15.8	0.1	1	23	394	416	394	416	0.99
9	13	2.5e-05	0.0015	19.2	1.0	1	23	422	444	422	444	0.98
10	13	6.9e-07	4.2e-05	24.1	2.4	1	23	450	472	450	472	0.98
11	13	9.5e-08	5.8e-06	26.8	0.7	1	23	478	500	478	500	0.99
12	13	6.6e-05	0.004	17.8	5.6	1	23	506	528	506	528	0.98
13	13	0.00014	0.0086	16.8	0.6	1	23	534	556	534	556	0.98

Sequence Information

Coding Sequence: ATGCCTTCCTCAGTCTGTAGAATTTGTTTGAGTAGTGATTTGAAAATGTACTACATCGAAAACAAATATTCACAAGAAGTCTATCAGAGGTTTACTGGAACTTTACTCGTCTCAGGAGACAACAGACCCAGCACAGTGTGCTACATGTGCGATGCACAGTTAGTAAGATGCTGGAGGTTCTTCGACATGTGCCAGAAATCAGAGAAAATCTGCACAGACCTGTATCAAACCAACATAGAGGTGACACAGGAGAGCTTAACTCAGCACAACCTGAAATGGATTTACAACTTGTCCACAGCACCAGTAAAAATAGTGACCAACATAAAAGAGATTGAAATCACTGTTAAAGAAGAAATTATTGCGAAAGAAGAAGACACTTCTGATGATGAATACCTGATGCCCATGTGCTCTGAACAAATTAAAAGTGATGACAAATGCAATGTATCTCCAATTACGGAAAGTAATGAGAATAACACTGCATCTACACGCATTAATGGAAATTGTACGAAtgaggatattaaaaatgtaaaaagtgataaaattaaaataaaaccagaaATTGTACTTAAAAGAGAAATACGATTGCGAAACCCATATTCATGTCCCATATGTAACAGTGCTTTCGATAAAAAGACTTTATTACGCAAGCACATGGCAACCCATGCTGACAACACATCTCATGTTTGCAAAGTTTGTAACAAAGCATTTGTCTATAGTGTTAGTCTAAGGATGCACATGAAAATTCACACAGAGAAGCAATATACTTGCAATGTTTGTGGCAAATCCTACTGTAAAAAGCAAGGCTTGAAGAATCACATGAATACACACACCGGAGCAAAGCCATATACATGTAATGTGTGCGAAAATTCATTCTCTAGTCCTTCaactttaataaaacataagacaATACACACGGGTGAGAGACCACACTCATGTGACGTGTGCTATAAAAAATTCAGGCAAAGTGGTGATTTGAGTAGACACATGAAATTGCATACTGGAGAGAAGCCATTTACCTGCAACATTTGCAACAAGTCATATATGAagagatatttattaaaaaatcatttgaaTACTCACACCGGGGAAAAGCCCTATAATTGCGAAGTTTGTGATAAGTCGTTCAGGAATGGCACCACTTTGGCATTACATACTGTACGTCATGCTGGTGAAAAGCCTTACACATGTCCTATATGTAAAAGTGTCTTTGATCTGAAGCCTCTTTTACTCAAACATATTGCGACCCACACCGACAACTCATCATATGTGTGCAAGATTTGTAGCAAAGTTTATGTTCATAGTATTCTTTTGAAGCAACATGAGAGAATCCACATGGATACGAGACGGTTTACTTGCAATGTGTGTGGCAAAACGTTCTGCAGGAGTATGGGTCTAATCAGCCACATGACAACACACACCGGAGAAAAGCCCTATAAGTGTGATGTATGTGAAAAGACATTTACTCGTAAAGAGACTTTAGAAGGACACATGAGGATACACACGGGGGAGAAACCATACTCATGTGATGTATGCAATAAGAAATTTACTTTCCACCATGGTCTGAACCGACATCTTAAAATACACACTGGAGAAAAACCCTTTAGTTGCAGCATCTGCAACATGTCATTTATAGGAGGTTATAAATTGAGAAGACATTTGAAAGTTCACAGCAAAGAAAGCCTTAGTTGCCTGTAA
Protein Sequence: MPSSVCRICLSSDLKMYYIENKYSQEVYQRFTGTLLVSGDNRPSTVCYMCDAQLVRCWRFFDMCQKSEKICTDLYQTNIEVTQESLTQHNLKWIYNLSTAPVKIVTNIKEIEITVKEEIIAKEEDTSDDEYLMPMCSEQIKSDDKCNVSPITESNENNTASTRINGNCTNEDIKNVKSDKIKIKPEIVLKREIRLRNPYSCPICNSAFDKKTLLRKHMATHADNTSHVCKVCNKAFVYSVSLRMHMKIHTEKQYTCNVCGKSYCKKQGLKNHMNTHTGAKPYTCNVCENSFSSPSTLIKHKTIHTGERPHSCDVCYKKFRQSGDLSRHMKLHTGEKPFTCNICNKSYMKRYLLKNHLNTHTGEKPYNCEVCDKSFRNGTTLALHTVRHAGEKPYTCPICKSVFDLKPLLLKHIATHTDNSSYVCKICSKVYVHSILLKQHERIHMDTRRFTCNVCGKTFCRSMGLISHMTTHTGEKPYKCDVCEKTFTRKETLEGHMRIHTGEKPYSCDVCNKKFTFHHGLNRHLKIHTGEKPFSCSICNMSFIGGYKLRRHLKVHSKESLSCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698837;
90% Identity: iTF_00696980;
80% Identity: iTF_00698837;