Edod000618.1
Basic Information
- Insect
- Eupithecia dodoneata
- Gene Symbol
- Arid2
- Assembly
- GCA_947044255.1
- Location
- CAMRHC010000002.1:6202848-6208732[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 2.6e-16 60.1 0.0 2 89 17 101 16 101 0.93 2 2 5.3 1.1e+04 -2.8 0.0 44 68 317 343 311 352 0.64
Sequence Information
- Coding Sequence
- ATGtctaaattacaaataaacactaaATCCAGCAGCTATATGAGGGATAAGGAAGCTTTTATGAAAGAGCTTCGGCAGTTCAATGAGAGCAAAAACATCACTTTGAAGCCCCCTATCGTGAACGGAATTGAATTGGATTTATATCTGTTTTACTCCTTAGTCCAACAAAGAGGTGGTATCGGGAAGGTGAATCAGACAGATGTCTGGGAAACGTTTTTGCGCCCATTGCAGCTGCCTCACCCTTGTATAAATGGATCCACATTACTGCGCAGGATATATGGGATACATTTGGAGAAatttgaGCGAACCAAAGGACCCCCAGGCCGTGATGATGATCTTGATATTGAAGAAGAGTTGACGAGACGCGGTCGGGGTAGCCATATGCCTCGAATCATGTTCAGTGGTGGTACATACATATCAGCGTCTGGCGAAGCGTTGCGTACAGTGCAACGTCCAACTGCGACCCACTCTGAACGGCTGGCATTGTCACTGCTCTCGCCAATGCCGAATGAACAAGACTTTGCTGTGAATGTGTGCACGGTACTAGCGGCGGACCATTCGAATCGGCTACCGTTGGCGGCAACCCCGCATATCTTGGACTTTCTGCTGGCACATGCTGGGGTTTATAATCATCCGAGTCTTCGAGAAACGATCGGCCGCTCCTACTTCGAAGCCCGTGGCCGCTATCCAGACGAGTTCTGGAAGCTCCGAGCCGGCGGTGGAGGCGCCAGGGAGCTGGCAGATGAGACCAAGTTCACTCAGACCATAGACGGAGAACAACCGGAACTGATGGTTCAAGCTATGGCAGCGCATAACAACCTGACTGATTGTCTGACGATGAAGGACAATTTTGAGGATCTGGAGAAGATTGTTAGCGATTTCGATATACTAGAAGACTGGGTGTCGGAACCATCAGAAGAATCCCAGCTGTTTGCGTCTGCACTGGGTGGTGGGGCTCACTGCGTCTACACACAGAGGGTGCTGCAAATCGCATCTATAGTCCGCTCTCTGTCCTTCCACGATGAGAATGTTCAATACTTGGCGAAGAACAACACTCTTATAAGGTTTTTACTTCTCTGCGCGAACTGCTGGGTCGGTACGCTACGGCAGTCGGGACTTGATACCCTTGGGAATGTATCTACAGAACTTATTATAAAGgacCCCGCGACCTGCCTTCTTTCCCGACACGTGCTATCAACCATCCAATCGGCGCTTGTATCCGAGGACCGCGCGCGCCTTCTCGCCGCTCTAGAGTTACTCAACAAACTGGCACAGAACGAGCTTAATGAGGACGCCTTGCTCAAGTCTTTGGAGGCAAAGgtATACTCGGATGTTTGCGCGCTGCTCACCCTCCGGGATATAATGGTGTTGGTTTGCACGCTGGAGTGCGTGTACGCATTGACGTCATTGGGCGACCGCGCCAGCGAATCAGTGGCGCGCGTGCCCGGATTGGTCCATACGTTGGTGTCGTTGGTTACTGTGGAGGTGAGTTTCAATTCATGTAATTAA
- Protein Sequence
- MSKLQINTKSSSYMRDKEAFMKELRQFNESKNITLKPPIVNGIELDLYLFYSLVQQRGGIGKVNQTDVWETFLRPLQLPHPCINGSTLLRRIYGIHLEKFERTKGPPGRDDDLDIEEELTRRGRGSHMPRIMFSGGTYISASGEALRTVQRPTATHSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLAATPHILDFLLAHAGVYNHPSLRETIGRSYFEARGRYPDEFWKLRAGGGGARELADETKFTQTIDGEQPELMVQAMAAHNNLTDCLTMKDNFEDLEKIVSDFDILEDWVSEPSEESQLFASALGGGAHCVYTQRVLQIASIVRSLSFHDENVQYLAKNNTLIRFLLLCANCWVGTLRQSGLDTLGNVSTELIIKDPATCLLSRHVLSTIQSALVSEDRARLLAALELLNKLAQNELNEDALLKSLEAKVYSDVCALLTLRDIMVLVCTLECVYALTSLGDRASESVARVPGLVHTLVSLVTVEVSFNSCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700787; iTF_00702676; iTF_00321382; iTF_00361396;
- 90% Identity
- iTF_00700787; iTF_00702676;
- 80% Identity
- -