Cv-a019415.1
Basic Information
- Insect
- Chloroclystis v-ata
- Gene Symbol
- Arid2
- Assembly
- GCA_963691955.1
- Location
- OY829909.1:2459439-2467116[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-18 6.3e-15 55.8 0.0 2 89 17 101 16 101 0.93
Sequence Information
- Coding Sequence
- ATGgctaaaacacaaataaacacTAAATCCAGCAGTTACATGAGAGATAAGGACGCTTTTCTGAAAGAGCTTCGCCAGTTCAATGAGGGGAAAAGTATTACACTGAAGCCACCCATAGTGAATGGAATAGAATTGgatttatatctattttacTCCTTAGTTCAACAAAGAGGCGGAATTGGAAAGGTGAATCAAACTGATGTTTGGGAAACATTTTTGAGACCTCTGCAGCTTCCACACCCCTGTGTCAATGGATCTACATTACTGCGCAGGATTTATGGAATTCATTTGGAGAAattCGAGCGTGCTAAAGGACCTCCGGGAAGGGACGATGACCTTGACATGGAGGAAGAATTGACACGACGCGGTCGAGGCAGCCATATGCCTCGAATAATGTTCAGTGGTGGTACATACATATCAGCATCCGGTGAAGCTCTTCGTTCTCAGCGGCCCACGGCCACTCACTCGGAGAGGTTGGCTCTATCTCTGCTGTCTCCGATGCCGAATGAACAGGACTTTGCTGTGAATGTGTGCACTGTGCTAGCCGCTGATCATTCTAATCGTATGCCGGTGGCTGCTACGCCGCATATACTGGACTTTCTGCTGGCTCATGCTGGGGTTTATAATCATCCGAGTCTCCGCGACACGATCGGCCGCTCCTACTACGAGTGCCGCGGCCGCTACCCCGACGAGTTCTGGCGGCTGCgagccggcggcggcggcgccaggGAACTAGCGGACGAGACCAAGTTCACACTCACAGTGGACGAGGAGCAACCGGACATGATGGTGCAGGCGATGGCGGCTCACAACAATCTGACGGACTGTCTCAATATGGACGGGGACTGTGATGAGCTGGACAAGATGTCCGTTGATTCTGATATATTAGAAGACTGGGTGACGGAGCCCTCAGAGGAGTCCCAACTCTTCGCCCCGGCCCTGTCCGGCGGCGCCAACTGCGTCTTCACACAGAGAGTGTTGCAGATCGCTTCTATAATACGCTCGTTGAGTTTCCACGAGGAAAATTTACAGTATTTCGCCAAGAATACTACTCTTATCCgATTTTTACTTCTCTGCGCTAACTGCTGGGTCGGTTCGCTGCGGCAATCAGGTCTTGATACTTTAGGGAATGTATCCACGGAACTCATTATCAAGGAGCCAGCTACCTGCCTAATCTCCCGTCATATTCTGTCCACTATACAATCGGCTTTGGTGTCTCCCGACCGCGCGAGAGTTTTGTCTGCGTTAGAGCTATTGAACAAGTTGGCTCAGAATGAATTAAACGAAGACGCGTTGTTAAAGTCTTTGGAGGCTAagGTGTACGCGGACGTATGTGCGTTGCTGACCCTCAGAGATATAATGGTGTTAGTGTGTACGTTGGAGTGCGTGTACGCACTCACGTCTCTGGGCGACCGCGCCAGTGAGGCGGTGGCGCGCGTGCCGGGGTTGGTGCACACCTTGGTGTCGCTGGTCACCGTGGAGGCACAAAGCTACGGTCCCAAAGCGTGTATCCTGATGCGTGTGGTGGAGACGGTGAGCGGGccggcggcgctggcggccgtGCACGACCGGGAACAGACACCGCACCCCGTGCAGCCGCAGGTAACACAACCACACTGCTGA
- Protein Sequence
- MAKTQINTKSSSYMRDKDAFLKELRQFNEGKSITLKPPIVNGIELDLYLFYSLVQQRGGIGKVNQTDVWETFLRPLQLPHPCVNGSTLLRRIYGIHLEKFERAKGPPGRDDDLDMEEELTRRGRGSHMPRIMFSGGTYISASGEALRSQRPTATHSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRMPVAATPHILDFLLAHAGVYNHPSLRDTIGRSYYECRGRYPDEFWRLRAGGGGARELADETKFTLTVDEEQPDMMVQAMAAHNNLTDCLNMDGDCDELDKMSVDSDILEDWVTEPSEESQLFAPALSGGANCVFTQRVLQIASIIRSLSFHEENLQYFAKNTTLIRFLLLCANCWVGSLRQSGLDTLGNVSTELIIKEPATCLISRHILSTIQSALVSPDRARVLSALELLNKLAQNELNEDALLKSLEAKVYADVCALLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPKACILMRVVETVSGPAALAAVHDREQTPHPVQPQVTQPHC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698054;
- 90% Identity
- -
- 80% Identity
- -