Cpec015414.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- Arid2
- Assembly
- GCA_951394395.1
- Location
- OX596367.1:4383003-4393359[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-19 1.5e-15 57.7 0.0 2 89 17 101 16 101 0.92 2 2 8.3 2e+04 -3.5 0.0 44 68 315 341 313 349 0.60
Sequence Information
- Coding Sequence
- ATGGCTAAAtcacaaataaacacaaaatcCAGCAGCTATATGAGGGATAGAGAGGCTTTTATGAAAGAACTCCGGCAGTTCAatgaaagtaaaaaCATCACATTGAAGCCCTCTATAGTGAATGGTATTGAGTTAGATTTATATCTATTTTACTCGCTAGTACAGCAAAGAGGAGGAATTGGCAAGgtAAATCAAACTGATGTCTGGGAGTCATTCCTGCGACCATTACGACTGCCACATCCCTGTATTAATGGATCAACATTATTGCGCAGGATATATGGGACACATTTGGAAAAATTTGAGCGAGCTAAAGGACCCCCTGGCCGCGACGATGATCTCGATATTGAAGAAGAGCTAACGCGCCGAGGACGCGGCAGCAACATGCCTCGAATCATGTTCAGTGGTGGTACATACATTTCAGCATCCGGCGAAGCCCTACGCACTACTCAGAAGCCGACTGCGACTCATTCGGAGCGTCTGGCGCTGTCTCTTCTCTCGCCGATGCCGAACGAGCAAGACTTTGCAGTGAATGTGTGCACCGTGCTAGCCGCAGATCTATCGAACCGATTGCCGCTGGCGGCGACTCCGCATATATTGGACTTCTTGCTCGCACATGCGGGCGTTTATAACCACCCAAGCCTTCGCGACACGATCGGGCGGTCGTACTTGGAAGCGCGCGGCCGCTACCCGGACGAGTTCTGGCAGATGCGCGCCGGCGGAGGCGGCGCGCGCGAGCTCGCGGACGAGACCAAGTTCACACAGAGCGGCGACGGCGAGCCCGAGCTCATGGTGCAAGCCATGGCGGCGCACAACAACCTGACCGACTGCCTCACTATGGATAAGGAGGATGTTGAGGAGGCGATGCCTGGAGAATTTCAGGAGCTCGAGGACTGGGTGACGGAGCCGTCGGAGGAGTCGCAGCTGTTCGCGCCGGCgctggcgggcggcgcggcgtgcGTGTACACACAGCGCGTGTTGCAGATCGCGTCCATCGTGCGCTCGCTCTCCTTCCACGACGAGAACGTGCAGTACCTGGCCAAGAACACCACGCTTATCAGATTTCTGCTACTCTGTGCCAATTGTTGGGTTGGCACGCTACGTCAGTCGGGTCTCGACACTCTCGGCAATGTGTCTACGGAACTGATCATCAAGGAACCAGCGACATGTCTGATCTCACGCCACATCCTATCCACGATCCAATCGGCGCTGGTATCCTCGGATAGATCGCGGGTGCTCGCCGCGCTCGAGTTACTCAACAAGCTAGCGCAGAACGAGCATAATGAAGATGCGCTGCTCAAGGCTTTGGAAGCTAAGGTGCTTATAAAATATCATAGTATCCTTTCTATTTCTCTCTCCCTCTCTCCATCCAACTTTCAAATCGTTCGCCTGAGGTTAAGCACtacacctgaccataacagctgcagtgttacCCAATGCGTGGCGCTGCATTGA
- Protein Sequence
- MAKSQINTKSSSYMRDREAFMKELRQFNESKNITLKPSIVNGIELDLYLFYSLVQQRGGIGKVNQTDVWESFLRPLRLPHPCINGSTLLRRIYGTHLEKFERAKGPPGRDDDLDIEEELTRRGRGSNMPRIMFSGGTYISASGEALRTTQKPTATHSERLALSLLSPMPNEQDFAVNVCTVLAADLSNRLPLAATPHILDFLLAHAGVYNHPSLRDTIGRSYLEARGRYPDEFWQMRAGGGGARELADETKFTQSGDGEPELMVQAMAAHNNLTDCLTMDKEDVEEAMPGEFQELEDWVTEPSEESQLFAPALAGGAACVYTQRVLQIASIVRSLSFHDENVQYLAKNTTLIRFLLLCANCWVGTLRQSGLDTLGNVSTELIIKEPATCLISRHILSTIQSALVSSDRSRVLAALELLNKLAQNEHNEDALLKALEAKVLIKYHSILSISLSLSPSNFQIVRLRLSTTPDHNSCSVTQCVALH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698054;
- 90% Identity
- -
- 80% Identity
- -