Ecen011586.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000800.1:21156-22055[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-11 6.4e-08 33.0 0.1 2 40 10 48 9 52 0.92 2 2 5.4 4.4e+03 -1.7 0.0 17 23 126 132 122 132 0.86
Sequence Information
- Coding Sequence
- ATGCCTCCTAAACGGGCATTGTGGTCTCAAGATGACCTGGTCTCAGCTGTTCGCGCAGTACAGAGAGGAATTATGAGTACGTATGCGGCTGCAGAAAGATACAAGATTCCAAGAAGAACCCTCAGAAATCATGTTGAGAGTGGAATTGTGGTGAAAAGCTTGGGTCGTAAGCCCGTATTGAATCCTGAACAGGAAGCTGATCTTGTGAAGAGGATAATCAGGTATGCGGAAATAAGTTTACCTGTCACACCAAGAATACTGCGTCGGTTGGTGTACAAATATTGCGTGCTTAATaacataaaacacaattttgatGAGACTGCTAAATGCGCAGGTAAAGACTGGCTTAAGGCGTTTATGAAAAGACATCCCGAATTATCCATACGAAAAGCACAGTTCATGAACCCGGCCAGAGcccaaaaactaaataaatttattgtggaTGACCACTTTGAAAGACTGAATGAGGTTTATGATAAACTGGAGCTGAAAGATCATCCCGAAAGAATATATAACATGGATGAGAAAGGGTGCCGTCTGACAATCCACCATCAGCAAAGTGTTTTGGCTAAAAAAGGAGCAAAACGGGTTCATATGCAGTCTTCTGAACATGCAGAGAGTGTGACTATTGCAGGTTGTGTAAACGCACTCGGTACTGCCATACCGCCAATGGTGATATTCAAGGGTCAACGTTTGAAGCCAGAATTGTACGACAATTTGCCACCGGGTTCTTTGGTTGAAAAGTCGGCAAAGGGATATATGACAAACGAACTTTTcaaggaatttttaaaacaccTGGCCCGATACAAAAGCGCAGGACCGTGCCTCTTGATATTTGATGGAGCAGCATGCCATTTAGACCTTTCCATTGTCGATGTATCAGAAACTGTTATAGATTGA
- Protein Sequence
- MPPKRALWSQDDLVSAVRAVQRGIMSTYAAAERYKIPRRTLRNHVESGIVVKSLGRKPVLNPEQEADLVKRIIRYAEISLPVTPRILRRLVYKYCVLNNIKHNFDETAKCAGKDWLKAFMKRHPELSIRKAQFMNPARAQKLNKFIVDDHFERLNEVYDKLELKDHPERIYNMDEKGCRLTIHHQQSVLAKKGAKRVHMQSSEHAESVTIAGCVNALGTAIPPMVIFKGQRLKPELYDNLPPGSLVEKSAKGYMTNELFKEFLKHLARYKSAGPCLLIFDGAACHLDLSIVDVSETVID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157585;
- 90% Identity
- iTF_01528226; iTF_00036632;
- 80% Identity
- -