Basic Information

Insect: Eupeodes luniger
Gene Symbol: -
Assembly: GCA_951509635.1
Location: OX608073.1:137925826-137927304[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.25 51 6.1 0.2 2 23 85 106 84 106 0.93

2 13 0.00012 0.024 16.6 0.5 1 23 154 177 154 177 0.98

3 13 0.00033 0.066 15.2 4.2 2 23 186 207 186 207 0.97

4 13 1.1e-06 0.00022 23.0 1.5 1 23 213 235 213 235 0.99

5 13 2.5e-06 0.00051 21.9 0.3 1 23 241 263 241 263 0.99

6 13 0.0001 0.02 16.8 4.8 2 23 269 290 268 290 0.96

7 13 2.2e-06 0.00044 22.1 0.8 1 23 296 318 296 318 0.98

8 13 1.3e-06 0.00026 22.8 1.4 1 23 324 346 324 346 0.99

9 13 2.1e-05 0.0043 19.0 2.5 1 23 352 374 352 374 0.99

10 13 8.9e-05 0.018 17.0 1.1 1 23 380 402 380 402 0.98

11 13 2.9e-07 5.8e-05 24.8 0.3 1 23 408 430 408 430 0.98

12 13 3.6e-06 0.00072 21.4 1.0 1 23 436 458 436 458 0.98

13 13 3.6e-05 0.0073 18.2 0.3 1 23 464 487 464 487 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.25	51	6.1	0.2	2	23	85	106	84	106	0.93
2	13	0.00012	0.024	16.6	0.5	1	23	154	177	154	177	0.98
3	13	0.00033	0.066	15.2	4.2	2	23	186	207	186	207	0.97
4	13	1.1e-06	0.00022	23.0	1.5	1	23	213	235	213	235	0.99
5	13	2.5e-06	0.00051	21.9	0.3	1	23	241	263	241	263	0.99
6	13	0.0001	0.02	16.8	4.8	2	23	269	290	268	290	0.96
7	13	2.2e-06	0.00044	22.1	0.8	1	23	296	318	296	318	0.98
8	13	1.3e-06	0.00026	22.8	1.4	1	23	324	346	324	346	0.99
9	13	2.1e-05	0.0043	19.0	2.5	1	23	352	374	352	374	0.99
10	13	8.9e-05	0.018	17.0	1.1	1	23	380	402	380	402	0.98
11	13	2.9e-07	5.8e-05	24.8	0.3	1	23	408	430	408	430	0.98
12	13	3.6e-06	0.00072	21.4	1.0	1	23	436	458	436	458	0.98
13	13	3.6e-05	0.0073	18.2	0.3	1	23	464	487	464	487	0.96

Sequence Information

Coding Sequence: ATGGCTGGCGAGTTAACACAAATCGGATTCTCTAATTTGGTCAAGGACGGCAATTGCAGCTTCACCGACTGGCCAGACGACGATATAGACAACGAAAGTCACATCAATGGAGTCATCATGACAGAGGACATGATTAAGCAAGAACCAGAGTTGGTAGTTGACTTAAATAATCCCGACGAGGAGCATAAAATACGCTCGTTCCTCAAGAAGACCATTGTCGATGATGAGGAGCGACAACAACTTAATTGGCTTACCTGTTTGGTCTGTGATGAACGCTTTCTGACTACCAAAGAACTTTCACTGCATGTGTTAGAGCATACGAAATCCGAATCTAAAGAAGATATCCCAAAGGAACTCACAAACCGACAAGCACCGAAAACTCAATACACGGGATTTTCGAGACAGGAACTCCTCCAAGACTATGTTAATATTGCCGTCGAGCTAGACGGAAAGGCTACTTACACCTGCAAACTATGCCCGAATAAAGTTTTTGCACGACAAGTTTCGATACGGAATCATATGAGAATCCACGAGAATCCAACATACAAAGAACGCTCTTGCCATATCTGCCATAAGACGTTCCTTCGGCGAGATACGCTGCTGGTCCACTTAAGGGTTCACAGCGATGAACGAAAGTACAAATGTGACGTTTGTGATGCTTCCTTCACACATTCCAGTTCCCTGGTCTCACACAAACGCATCCACACTGGTGAGAAGCCTTACGTGTGTACGATTTGTAGCAAAGCGTTTCGCGAATCTGGTCAGCTCGCGGCTCACAAGAAAACCCACTTTGAGAAGCTTTTGCAATGTCCCAAATGCGACAAGAAGTTTACCACCAATAAGACTCTTCGCGGCCACTGCCGGACGCATACCGACGAGCGCCCGTATGCGTGCTCCTACTGCGCAAAGACGTTTCGTTCAAGTACGGGTCTGACAACACATCTGCGGGTGCATACAGGTGAGAAGCCGTACAAATGCGAGATATGCTCCTATGCTACCAAACAGTCCGGATACTTGCGGACGCACATGCGAACCCATACAGGCGAGAGGCCCTACAAGTGCTCCTACTGTGACAAGGGGTTCTCGGAGAGGAAGCGTCTAGTGACACACACCCGAAGTCATACGGGTGAACGTCCCTACAAATGTATATACTGCGATTCGGCATTCGCTCGCACTGATAACCTCAAGTATCACCTGCGAACTCACACCGGTGAGCGTCCCTTCGAATGTGTTGATTGTGGAAAACGATTTACCCAACGTACAGCTTTAATTGTCCATCAAAAGATTCACACCGACGAAAAGCCATATTCTTGTCCCCATTGTGACATGAACTTCCGCCAGAGCGGGACCTTGGTCACTCATTTGTTGATGCACTCAAACGAGCGACCATTTAAATGTGATCTCTGCGAAATGGGATTTAGACAGAGGGCATTGCTGAAGCGACATGTTGCCAGAGTACATGGCGATGGGggtgtttaa
Protein Sequence: MAGELTQIGFSNLVKDGNCSFTDWPDDDIDNESHINGVIMTEDMIKQEPELVVDLNNPDEEHKIRSFLKKTIVDDEERQQLNWLTCLVCDERFLTTKELSLHVLEHTKSESKEDIPKELTNRQAPKTQYTGFSRQELLQDYVNIAVELDGKATYTCKLCPNKVFARQVSIRNHMRIHENPTYKERSCHICHKTFLRRDTLLVHLRVHSDERKYKCDVCDASFTHSSSLVSHKRIHTGEKPYVCTICSKAFRESGQLAAHKKTHFEKLLQCPKCDKKFTTNKTLRGHCRTHTDERPYACSYCAKTFRSSTGLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPYKCSYCDKGFSERKRLVTHTRSHTGERPYKCIYCDSAFARTDNLKYHLRTHTGERPFECVDCGKRFTQRTALIVHQKIHTDEKPYSCPHCDMNFRQSGTLVTHLLMHSNERPFKCDLCEMGFRQRALLKRHVARVHGDGGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975266;
90% Identity: iTF_00664520;
80% Identity: iTF_00695126;