Mmyr004822.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- -
- Assembly
- GCA_963931805.1
- Location
- OZ007496.1:207715505-207786120[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.7e-11 1.3e-07 32.0 0.0 1 38 544 582 544 587 0.89 2 4 1.5e-13 4.1e-10 40.1 0.1 2 39 599 636 598 639 0.94 3 4 4.5e-18 1.2e-14 54.5 0.0 1 45 653 698 653 698 0.98 4 4 2e-19 5.6e-16 58.8 0.0 1 42 705 747 705 750 0.96
Sequence Information
- Coding Sequence
- ATGCAAGATCGTCGTGGGATCATCGCATCCTTGGGCATTAGCATGACAAGCATCAATAAAATATTGCAAGATCATTTAGTGGTAGGTCTTCTTCGGACAGCCGAACAATTGAAAATCAAGGGGCTTTGTGAGACAGCAGAAAGTGTTGATGATATATCGGAGGCAGCGACGGCAACAATAACCGTATCCGAAAACATAACTCAGTCAGTTGTTGGGAATACAGTAAACACagtacagggcaatgcgatagtAACTACACATGCAATTGCGAATAATACAAGTACTCACACAACAACAAATTTGCATAACAGTAATATTAATCAAAATATCAATGCTGTAATTGGCCCTCCCACAGCAACATCAACGCCGCAATTGCGAAAGTCACGAGTTCGAAAACGTTCGAAATCTCCGGatacaaatcaacaacaacagcagcagcagcagcaacaacaacaacaacaacaacaacaacagcaccagcaacatcagcatcatcatcagcagcaacagcaacagcagcaacaacaacaacagcatcatcaacatcaacatcaacaacaacatcagCAGCAGCATCAACACCATCATCAACAGCAGGCAATTCTAAATCAAAATCTTAACACAGCTGCCATTGTTAGCTTGCAGCAAACCTCATCAGGTAGTTACATACCAGTATCAGCTGGACAAGCGATAACAACATCTGCAGTTAGCCAACAAAATTCTGAAGATTCAGATTCGGATAAACCCAGTGCACAGAAGATTTGTAAAACGGAAGTTGGCAGCTCACCGACGTCAAACAATGGTAATGTAACTGTCGCTCCAGGAACAGCAATTGTAACACAAATTGTTGTGGCAAGAGAAACAAAGGATAAAAACATGACCAGTCTAGGAATGGGAATGAATGGCGGTCTCCTTGGAGTACCAATGGGATTTTTGGATTTTGCACCGGAACCTCCAGCGCCATCAGCAACACCTGTTACAGTTGCAGATCACGTGGACATGTCATGCAACCCGAGCACAGACACCAGAGACTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCACAGCACATGATCCAACGGCTTGATCAATCACCGATGCATACGATCCACCATCAGTCGGCAACAGGTGATGAGAGCAACTCCAATTTGATTCAGCATATTAAGAGTGAAGTGATTGAAGTAAAGCCACAACCTCAGCATCATcatcaacagcagcaacaacagcagcaacagcaacaacagcagcaacaacaacaacagttaCATGCGCAAGCTTTATCACAACAAGGACAAtcccaacaacagcagcaacaacaacatcagcaacagcaacagcatcaccaacaacaacagcaacagcatccACATCAGGATATTTCTGGTGCGACAGTTATGGAAATTGATCCCAGCAATATTAAACATGAACCGGGAATGATAATAACACCGGAGATTGTGACAATGATGGCGACGGGTCATATGGATATATATTCAGATGCTAGCGAAGATTCTTTGATGATAGCTAATGGTTCCCCAAACGACAATAATGAACCACATTATACAAACTTGGACCAACAACAAGATATTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAATATGAGTTTGACGAAAGCATCGGTAACATATGGTATCCCGTCAACGACATTGTGGCAAAGGGCACATAGAATGGGTATAGAAACACCTAAAAAAGAGGGCGGAGCAAAATCATGGAATGAAGATTCATTAAATAGTGCTTTAGAAGCACTTAGAACAGGCCAGATATCGGCAAATAAAGCCTCTAAAGCTTATGGTATTCCGTCCTCTACATTATATAAAATCGCCAGACGGGAAGGTATACGATTAGCTGCACCATTTAATGCAGCTCCAACAACATGGACACCAGAAGATTTGGAGCGTGCTTTAGAAGCAATTCGTGCTGGTCACACATCCGTCCAAAAGGCCAGTTCAGAATTCGGTATACCAACAGGAACGCTATATGGTAGATGTAAAAGAGAAGGCATTGAACTGTCCCGCTCAAATCCTACCCCATGGTCAGAGGATGCTATGAATGAAGCACTTAACTCTGTTAgAGTTGGTCAAATGTCTATAAATCAAGCAGCTATACACTACAATTTACCATATAGTTCACTGTATGGTCGCTTTAAACGTGGTAAATACGATATTACAAATACAAGTGCTTCTTCCATTAATAACACATCCGGCAACACAAGTGCAAGTATTGAAATCATTGAGCACAGTCCAGAGAATTCGTTGCACATGTTTCAGCAACAATTCCAATATAGTCCGGCGCCTCAGTCCAATCATCAaactcaacaacaacaacagcaacagcagcaccaacagcaacagcagcagcaacaacagcagcatcaACAACACCAACAGCAACCTCAGCAACATATTCATCAACATGTCGTacatattcaacaacaacaagcaCCACATCATCACCAACAACAACATATCCAACAACAAGATGTTGTTACTTCAACAAGCCAAGTCCACACTCAGGCAGGGCAAATCCAACAAATCTATCACCACCACAGTACCCCCGAAAGGAGTTGA
- Protein Sequence
- MQDRRGIIASLGISMTSINKILQDHLVVGLLRTAEQLKIKGLCETAESVDDISEAATATITVSENITQSVVGNTVNTVQGNAIVTTHAIANNTSTHTTTNLHNSNINQNINAVIGPPTATSTPQLRKSRVRKRSKSPDTNQQQQQQQQQQQQQQQQQQHQQHQHHHQQQQQQQQQQQQHHQHQHQQQHQQQHQHHHQQQAILNQNLNTAAIVSLQQTSSGSYIPVSAGQAITTSAVSQQNSEDSDSDKPSAQKICKTEVGSSPTSNNGNVTVAPGTAIVTQIVVARETKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVADHVDMSCNPSTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSATGDESNSNLIQHIKSEVIEVKPQPQHHHQQQQQQQQQQQQQQQQQQLHAQALSQQGQSQQQQQQQHQQQQQHHQQQQQQHPHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQQQDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGAKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDITNTSASSINNTSGNTSASIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQHQQQQQQQQQQHQQHQQQPQQHIHQHVVHIQQQQAPHHHQQQHIQQQDVVTSTSQVHTQAGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694505;
- 90% Identity
- -
- 80% Identity
- -