Ecor021729.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- Hr39
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000399.1:705562-713950[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.26 4.1e+03 -2.3 1.0 154 171 34 51 3 192 0.62 2 4 2 3.2e+04 -5.7 8.9 54 160 231 326 202 360 0.37 3 4 5.6e-15 9e-11 42.6 6.2 1 158 458 596 458 612 0.67 4 4 1.6e-78 2.6e-74 251.9 0.1 200 408 612 813 600 813 0.95
Sequence Information
- Coding Sequence
- ATGTCATCATCAATAAAAAGCGATTCATCGGCATACAATGCAGCCCACGGCAGCACAATCACCAACATCGTCGGCGTCACACAATCATCAACGACCACATCATCGTTATCGTCATCATCAATCATTCGCAACAATAATGTCTCAGTGACCAATATCAAATGCGAAGAGGATCGCAATAGCAGCAGCAGCTGTAGTCCCCTGCGAAAAAGTATTCCATCGTCTATTGTCACAACATCCTACTACAATCAAGGTAATGGATCCATCCGGATTCCGGTTACTAAACGGGATGACTCTGACTCGGAGAGCGAATTGTCGCATATTGAAAACCTCAAGGTCAATCGGCGATCGGTCAGCCAATCTGTGAAAAATGGCCCAAGGCCAATGTCATGGGAGGGAGAATTATCTGACACTGAAAACGATCCGATGGACACTGAGAACTCGACCAGTTGCGACAAAACCTTCTCGAGTGCGCCAGTGACAGTGATCAAAAACGATCCAGATCGAAAACCTATACTTGATCAGATATGTCTCGAGATAAATTCATCACACTACATAAGCAAAAAGCCACAGAGTGATCCTATTAATCTTAAGTACGAGCCAGGACTTCTAGGCGATCCCACCGGCGCCAGTAACTCGCCATTGCTTGCACGTTCCAAGACGTCAGCCAATTTGTTGCCTACTAATCCTAGCCCTGATTCTGCCATTCATTCCGCGTACACGCACAGTTCACCAAGTGAGTCGCCCCTAACATCCCGGCACGCCACTTATACACCGTCATTGAGTCGCAATAACAGCGATGCCTCACACAGCAGTTGCTACTCCTACAGCTCGGAGTTTAGCCCGACCCACTCCCCCATCGCAGGCCGCCACAATATGTACGGTAGCTACAGTGGCGGCTCTCTTCATCATTCCGTTTTATATCGACCGACCATCTCGGATAGTGGCAGCAGTGCTGCCAGTTGTTCCTCGTCGGACCCACAGAATCTATCGCAATCACAAGCCGCTGTTGTGGCAGCAGCGGCATCTGCGCTGGCCGCAGCCTCTTCCACATCAATCTCGGTGAATGGCTCTACTCCGCCCGGAATCAAGACCGAGGAGCTGCTGTTCGATAGTGAAGCCATCCCTTCGGCGGGCATTTCACGACAGCAGCTTATCAACTCGCCGTGTCCCATTTGTGGGGACAAGATCTCTGGCTTCCACTATGGAATATTTTCTTGTGAGTCTTGCAAGGGTTTTTTCAAGAGAACGGTGCAGAACCGCAAGAATTATGTGTGTGTGCGAGGTGGACCTTGCCCGGTCACCATTTCAACGCGCAAAAAATGTCCGGCATGCCGCTTCGATAAGTGCCTGCAAAAAGGCATGAAACTCGAAGCTATTCGAGAAGATCGAACTCGAGGTGGACGCTCTACTTACCAGTGTTCTTATACGCTGCCCAATTCAATGCTCAGCCCATTGCTGAACAATGACCAATCTAACCAGCAACAACAACAACAGCAACAAAGTGGCTCTTCCCGCATGGGAGTTAACGGCTTTGTCATCAAGACAGAGCAACCAGACAGCAGCACGGGTGGAACATCGACCCCAACACCAGGAAGTAGTAGTAACTATCAACGTTCCACAAGTCACGAAATACCCACCCTGCTGCAGGAGATAATGAACGTTGAACATCTGTGGCAGTACAATGCAACTGAGTTGGCACGACTGAATCAACCATTGTCGGCGTCGTGTTCCTCTTCGTCGACGTCGACGTCATCATCATCGGCATCGACATCGGCGGCGACATCTGGTAATAATATTGCCTCAAATCCGCTGCTGGCCAGCGCCGGTCTCTCATCCAACGGCGAGAATGCAAATCCCGACTTAATAGCCAACCTGTGCACAGTTGCTGACCATCGATTGTATAAGATTGTCAAATGGTGCAAGAGTTTGCCACTTTTTAAAAATATTTCTATTGATGATCAAATTTGCCTGCTTATCAATTCATGGTGTGAACTTTTATTGTTTTCATGTTGCTTCCGATCGATTGATTCACCCGGCGAGATTAAAATCTCACAGGGCAAGTCAATAAATTTGGCTCGAGCGAAGTCGAATGGTTTGCAGTCGTGCATTGAACGGATGCTCAATCTGACAGACCATTTACGACGATTACGAGTGGATCGGTATGAATATGTTGCCATGAAAGTTATCGTTTTACTACAATCAGATACATCGGAATTGACTGAACCGGTCAAAGTACGTGAGTGTCAAGAGAAGGCATTACAATCCTTGCAAGCCTATACGTTAGCCTTTTATCCTGAAATGCCATCGAAATTTGGTGAATTACTTTTAAGGATTCCAGAGTTACAAAGAACGTGTCAGCTTGGTAAGGAGATGCTTACCATTAAATCTCGTGATGGTGGTGATTTTAATTTACTTATGGAACTTCTACGCGGAGAACATTGA
- Protein Sequence
- MSSSIKSDSSAYNAAHGSTITNIVGVTQSSTTTSSLSSSSIIRNNNVSVTNIKCEEDRNSSSSCSPLRKSIPSSIVTTSYYNQGNGSIRIPVTKRDDSDSESELSHIENLKVNRRSVSQSVKNGPRPMSWEGELSDTENDPMDTENSTSCDKTFSSAPVTVIKNDPDRKPILDQICLEINSSHYISKKPQSDPINLKYEPGLLGDPTGASNSPLLARSKTSANLLPTNPSPDSAIHSAYTHSSPSESPLTSRHATYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIAGRHNMYGSYSGGSLHHSVLYRPTISDSGSSAASCSSSDPQNLSQSQAAVVAAAASALAAASSTSISVNGSTPPGIKTEELLFDSEAIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLNNDQSNQQQQQQQQSGSSRMGVNGFVIKTEQPDSSTGGTSTPTPGSSSNYQRSTSHEIPTLLQEIMNVEHLWQYNATELARLNQPLSASCSSSSTSTSSSSASTSAATSGNNIASNPLLASAGLSSNGENANPDLIANLCTVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDSPGEIKISQGKSINLARAKSNGLQSCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELTEPVKVRECQEKALQSLQAYTLAFYPEMPSKFGELLLRIPELQRTCQLGKEMLTIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311850;
- 90% Identity
- iTF_00694670;
- 80% Identity
- iTF_00693912;