Ecor032192.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- -
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010003680.1:27351-29249[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-08 8.5e-06 26.2 0.0 5 38 1 34 1 38 0.94 2 2 3.5 1.5e+03 -0.2 0.0 15 28 609 622 608 624 0.91
Sequence Information
- Coding Sequence
- ATGAAAAAAGCGGTGGATATGGTGGTAAAGGAGGGAGTTTCATTGCGAAAAGCTGCTAAAAATAATGGTGTGGCATTCCAAACCCTTTCGCGGTATGTGAAAGTTTTCAAAGAATCTCCTTCTGCAAGATTATACccgaactacgcagtaaatgccgtgtttagtaaggaagaagaactatctctagcggactatataaaaaactgctccactatgttttacgggttgactttgctagatgtagcgcgtttggcttatgagacggcagttgctaactccaaaaaaatgccagaatattggataaaaaacaagaaagcgagcactgactggctcaagcgcttccgtaaaagaaatcctacacttgcccttcgcactccagaggcatgcagcctatctcgggcaacttcgttcaataggcacaatgttaacaagttttatgacaacttattcgacgtcctgtcacgatcttcagacggattttcttcaggaactcgtatttataatctggacgaaaccggggtaacaacggtccagattcctgcgaaaattcttgcacaaaaaggaatgaaacaagtcagtaaagtaaccagcgctgaaagaggaacgttagtcaccttgtgttgcattgtaagtgcaactggccaatacatccctccagtaatgatttttcccagagtgcattttaaagaccatatgctgcttggtgcacctgcaggtacacttggtttggcaaatccatccgggtggatgaactcgacgtgttttttcaaagtggtggaacattttgtgaaatttacatcttgttccaaagaaaatcctaccttgttgttgatggacaatcacgaaagccacatcagcgtagccgctctcaattatggaaaagaacatggtgtaataatgatgacttttccaccacattcgtcgaacaaaatgcagccactggatgtctccgtctataaaccgtttaaaacggcgtacaaccaagcgatagactcattcatgatgcagaatcctggtaagacgttttccatttacgacatagcaaaagcagttggttacgcttTTGATAAGTCGATCATCATGGCAGGGTTTCAAAAGCCTGGAATCTATCCTCCGGACAGAAATGCTTTCACTGATGTGGACTTTATGAGTAGTTTGGTCACCGACAGGCCTCTTATTGATGCAACTGAGGAAACAGAACCAAGCGATGGAGTATCGACACTCAACACACCAGGAAGAACTGACCTTGAAGGAGAAACAATTTTAAATCAACCCGGACGTCAAAAACCGCAAACTGTTTTTATCAGCCCAGAACAGTTTAAAGGCTACCCCAAGGCTGCACCAAGACAGAAGAATAAGAGGAAGCAACGGAAAAAAGGAAGGAGTACGATACTGACGGACACGCCGGAAAAAGAAGAATTAGAAAAGAAAGAATTGTTAAAAAGGACACCAAAAACGAAGATTCAAGCTGTCAAAAAACGAAAGATACTACAATCTGAGTCTGAATCAGATGACAATGATGACATAATTCTTCAAGATTGCTCTTTAGACGGTTCGTTCGTCAGTGTGCGCTCTACGGAGGAAATTTTTTCACAGGAAGTTAAAACTGGGGCCTATGTCTTGGTTCGATTCAATGCGGACAAAAATAAAAGAGTTTATTATATTGGCGAAATAATAAAGGACAAGGACGAAAGCAATCACTACCAAATTCTTTTCCTGCGGAGGAGCGGTACAAGGAATAAATTCACTGAGCCTGAAGTTGAGGATATTGCGTCAGTAGCACACGAAGATATAGAGCTGGTGCTGCCAACGCCGACTCCATGTGGTCACACTAGTCGCCAAAAGGCATCTGTTATGTTTGATGTTGACTTCCAGGGCTATGGAAGCAGCCTCAAGTGA
- Protein Sequence
- MKKAVDMVVKEGVSLRKAAKNNGVAFQTLSRYVKVFKESPSARLYPNYAVNAVFSKEEELSLADYIKNCSTMFYGLTLLDVARLAYETAVANSKKMPEYWIKNKKASTDWLKRFRKRNPTLALRTPEACSLSRATSFNRHNVNKFYDNLFDVLSRSSDGFSSGTRIYNLDETGVTTVQIPAKILAQKGMKQVSKVTSAERGTLVTLCCIVSATGQYIPPVMIFPRVHFKDHMLLGAPAGTLGLANPSGWMNSTCFFKVVEHFVKFTSCSKENPTLLLMDNHESHISVAALNYGKEHGVIMMTFPPHSSNKMQPLDVSVYKPFKTAYNQAIDSFMMQNPGKTFSIYDIAKAVGYAFDKSIIMAGFQKPGIYPPDRNAFTDVDFMSSLVTDRPLIDATEETEPSDGVSTLNTPGRTDLEGETILNQPGRQKPQTVFISPEQFKGYPKAAPRQKNKRKQRKKGRSTILTDTPEKEELEKKELLKRTPKTKIQAVKKRKILQSESESDDNDDIILQDCSLDGSFVSVRSTEEIFSQEVKTGAYVLVRFNADKNKRVYYIGEIIKDKDESNHYQILFLRRSGTRNKFTEPEVEDIASVAHEDIELVLPTPTPCGHTSRQKASVMFDVDFQGYGSSLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00240616;
- 90% Identity
- iTF_00693743;
- 80% Identity
- -