Euro001550.1
Basic Information
- Insect
- Eupelmus urozonus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_900480035.1
- Location
- UELX01000162.1:6909-12390[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.6e-114 1.7e-109 366.3 37.4 1 300 31 328 31 328 0.96 2 3 0.0051 1.4e+02 2.2 2.9 122 171 328 377 326 380 0.91 3 3 0.052 1.4e+03 -1.2 5.8 194 238 359 402 346 403 0.59
Sequence Information
- Coding Sequence
- ATGACAATGGAGACATCCGTAGCTGGAAGGAGGCGAACTGCCACTAGGCATTCTGCCGAAGATCAAGCGTTAGACCAGATTGCCAAAGAGGCAGAGGCAAGATTAGCTGCAAGAAGACAAGCTCGAGCAGAAGCAAGAGAAATAAGAATGAGAGAATTAGAGAGGCAACAAAAAGAAGCAGAGGAAAATGCGGATAGAGTATTCGATATGTGCACAGCGGATGCTAACAGAGCTATGCGTGTAACACCAGATCCCATTCGTGCTTCTCGTCTTCTtgcaaatacaaataattttcaatcaagTCGAAGATCTTCTGAAGATTCTCTAGAAGAAGCTGGGCTTGGAAGAGATCTTCgattagaaCTAAaggaatttgaagaaaaatttagaaaagcaaTGATAGCAAATGCTCAGCTAGATAATGAAAAGTCTTCCTATGCATATCAAGTTGATTTATTGAAAGATAAGTTAGAGGAGCTTGAAGAAGTGACTGCTCAATTACGACGTGAACTCAGGGAAAAGAATCGTGAAGCAGATCAGTCTAAACGTCTTAGTCAAAGATTAAAAGAAGATTTAGATATTTGTAGAGCACAGCTTCAAGAAAGAGACACTCTAATTCAGGAAAATGGACTGGTCATTGTGGAAGATGAAGGCAGTGAAAATGAAGAAACACAAAAAGAAAACGGTCCTGTTTATCGAAAAAGAGTGCTAGTCAGTACAGAAGCTGcagaattattacaaaatgctGGAGAAGGTTCATTAGatgTCCGACTGAGAAAGTTTGCATCAGAAAAGAAAGAATTACAAGATGAGATTAGGCATCTCAGGTTAGAATTAGAGGAAGCGAGGAATCGAATGAGGCCCGAGCGATCTTCAGGTTCTGTGCttgGCTTATCCGATTCAGAAGATGCACAAAGGGAAGCTAATAAACTTTTGgcagattataaatttaagctACAAAAAGCAGAACAAGATATGTCAACTCTTCAAGCAACTGTGGCCAGGCTAGAAAGTCAAGTAATTCGTTATAAGTCAGCAGCTGAGGCCTCTGAGAAAGCAGAGGATGAGTTAAAGGTTGAAAAAAGGAAGTTGCAAAGAGagGTAAGAGAATCACAAGGTCGAGTGGAGGAACTGGAAACAGCAAATTCTCATTTGCAGCGACGCCTGGACAAGCTGAAAAATGCTAAGTCAGCCCTTTTAAAAGAACTTTGA
- Protein Sequence
- MTMETSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVFDMCTADANRAMRVTPDPIRASRLLANTNNFQSSRRSSEDSLEEAGLGRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEEVTAQLRRELREKNREADQSKRLSQRLKEDLDICRAQLQERDTLIQENGLVIVEDEGSENEETQKENGPVYRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRMRPERSSGSVLGLSDSEDAQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01428278;
- 80% Identity
- -