Basic Information

Gene Symbol
BAS1
Assembly
GCA_900480035.1
Location
UELX01000906.1:17925-21115[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.042 58 4.4 0.0 22 43 235 258 222 261 0.79
2 6 5.6e-11 7.9e-08 32.8 0.6 1 44 267 312 267 314 0.96
3 6 2.4e-07 0.00034 21.2 0.1 2 43 322 367 321 370 0.96
4 6 1.4e-13 1.9e-10 41.2 0.0 1 45 376 421 376 422 0.96
5 6 1e-09 1.4e-06 28.8 0.2 4 46 432 474 429 474 0.95
6 6 3 4.1e+03 -1.5 0.0 6 22 552 568 552 580 0.80

Sequence Information

Coding Sequence
ATGAGTGAAGAAGAGGACAATCAGTCTTTAATAGATGAAATTCAGGCCTTAGAAAATGTATTAGATCAGAAACGAACTTTAGATGTTAACGAATATCCCAAGTCCAgtaaaacatcaaataaaaatgtattgggAAATGTGGAAACAAATCTCAAAACAGAACAAAATGGAATTAATGAACCTATGAATGTGGATGAAGAAATTgttaatgatgatgatgaatatGCAAATTATAGTTGTGATAGTTTACAAGATTTATTTgaactcaataaaaaattaattggattaTTAGAACAATCTAGAGAAAAAGTGGAATCTCTTTTAgaagaatgtataaaaaaggAACGGTATATTGAAGAACAAATTTCTAAAACTGCTTCTTCTTGGCAGAGTAAAATAGTAAGCTTTAATGCTGGCATGCCTTAttttaaggataaaaattattattcagccAAAAGAAATGAAGATACagaagctaaaattaaaaatggcgAGTTACGATTGGCTGAACTTCAACGTATTCATCGTTGGAGTCAAATagataaaagtaatttgttAAAAGCTATAAGATATGAAGTCACATTAACTCTATTAAGGAAAGATGGACCTGacgaaatatatattgataattccATCACTAAAACAAGTCAGTTACCAGTTGATGTCAAAAGAGCTATTGGATCACTAGGTTCTATGAAATTTGActggttaaaaatagctaatGATATTCCTGATAATAAACATACTGCCGAAGAATGTGAAGTTATGTGGAATGTTTTTTTGCATCctgatattaataaacaaagatGGACTTCAagagaagataaaaatttaaatcgtatAGTAGAAGAATATGAATTTGAAGACTGGGATGGTATTGCCAAAGAATTAAAGACAAATCGTAGTGGTTATCAGTGTTTTGTTAggtataatacaaataattggaaaaatttaatgaaaggcCAATCATGGTCACCAGTAGATGACAAAACGCTTACTCATCTTGTACAAAGGCTCAAAATTGGAGATTATATTCCATGGGGATATATTGCAAGTTGCATGGGTAATTGGACAAAACAACAGatatattttcgATGGACCTACAGTTTAGCTCCTCATTTAAAGAAAGGAAGATTTTCAACAAAAGAAGATGAAACACTTTTATCTGCTGTGCAAAAACATGGACCAAACTTCAGCAAAATATCAGCTTTAGAAATGAATAACAGGACAAATATACAACTAAAAGAACACTATCAGACACTGCAGGCAAGATGTAgcgctgttaaaaaaatttggaatttacaAGAAGATGCCAGACTTCTTGAACTCCAACAAAAGTATGGCTGTAATTGggcaaaaattataacagaatTGCCTGGTACTACAAGGATACAAGCTAGGCATCGTTATGCTACTCTTTTGCGTTTTCATCGAAAAGGTATTggtttagaaaatattagtaGGACACAATTAGATCCATTGTTAGATCATACTACAATGACTTACACCAGTAATTCTCCTTGGTCTGGtgagaataaagaaatatatgtCAAACATTTAAAGATAGATGatcatcttataaattttttcaaaaaagacaatatgctaaaaaaaattcaaaatatcaaaaaatcataCAATGTAGATGAACTGCAGGAAGATACTAAGAaagtttatgatattttacaaaagcttggtgcaaatttaaatatacctGATATTATATGTGATGACTATGAActgagtgaaaaaaatttacaattacttatATCATTACAAAGTTATATgcaacaacaaaaaacaaattttaatgaagatgTTGAATATATTAGGTGCAGAATGTTTGGCCCACAAGAACCACTCACcaaaaaagaacgttttataCCTCCTCTACCATTTGGTTTTTGTACACCAAAGactgctaaaaaaaataatactgatactattgattataatattgaCACTGATGAATTTCATCAAATAGAATTACTTAAGACTTTACCATCTGATAAATATGTGTCAGAATACATTGGAGAAGATGTGGAGTGTGAATTTGGAAAATTACAGAAAGCTATAACAAAAAAGGATTCAATAATAAgaccaaataaaatatattcattaaagtGTAAACCATTTGCTAACACAGTTTTATTCTGTGAAGATGATGAAGAAATTTATCAGGAAGCAAGTactttatCAACAACtacagattttattgaaaataaatactatGACTGGGAATCGAATAAAATGATTACTAGCAGTTctccaaaagaaaaagtaatattagaaGGTGTGCCTATACAAATAATAGAACCATCTAGAACAACACTCCAAGCATATCAAGAACTTTTGCTGATTACCGCAAGTATTCCTTCTACTTCTTTTGAaccaaaacaaaattataaactaactCTTAGAGGACGAGATGCTTTAAGTTTGTTCAAACGACGTTATGAACAGTTATTTCATATGCCTACTGGCTTATGTAGAATAATACCACCTGACATAGTGGACGAAAGTGCATTTTTACCTGcactagaaaaattaaaaaagaagaaactgaaacttaaaaataaaaaaaagaaacatttaaatactGTGAAAGAATGTGTAAATACTTCATAA
Protein Sequence
MSEEEDNQSLIDEIQALENVLDQKRTLDVNEYPKSSKTSNKNVLGNVETNLKTEQNGINEPMNVDEEIVNDDDEYANYSCDSLQDLFELNKKLIGLLEQSREKVESLLEECIKKERYIEEQISKTASSWQSKIVSFNAGMPYFKDKNYYSAKRNEDTEAKIKNGELRLAELQRIHRWSQIDKSNLLKAIRYEVTLTLLRKDGPDEIYIDNSITKTSQLPVDVKRAIGSLGSMKFDWLKIANDIPDNKHTAEECEVMWNVFLHPDINKQRWTSREDKNLNRIVEEYEFEDWDGIAKELKTNRSGYQCFVRYNTNNWKNLMKGQSWSPVDDKTLTHLVQRLKIGDYIPWGYIASCMGNWTKQQIYFRWTYSLAPHLKKGRFSTKEDETLLSAVQKHGPNFSKISALEMNNRTNIQLKEHYQTLQARCSAVKKIWNLQEDARLLELQQKYGCNWAKIITELPGTTRIQARHRYATLLRFHRKGIGLENISRTQLDPLLDHTTMTYTSNSPWSGENKEIYVKHLKIDDHLINFFKKDNMLKKIQNIKKSYNVDELQEDTKKVYDILQKLGANLNIPDIICDDYELSEKNLQLLISLQSYMQQQKTNFNEDVEYIRCRMFGPQEPLTKKERFIPPLPFGFCTPKTAKKNNTDTIDYNIDTDEFHQIELLKTLPSDKYVSEYIGEDVECEFGKLQKAITKKDSIIRPNKIYSLKCKPFANTVLFCEDDEEIYQEASTLSTTTDFIENKYYDWESNKMITSSSPKEKVILEGVPIQIIEPSRTTLQAYQELLLITASIPSTSFEPKQNYKLTLRGRDALSLFKRRYEQLFHMPTGLCRIIPPDIVDESAFLPALEKLKKKKLKLKNKKKKHLNTVKECVNTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690107; iTF_00691868;
90% Identity
iTF_00690107;
80% Identity
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