Basic Information

Gene Symbol
BAS1
Assembly
GCA_030522745.1
Location
JAPYZB010000045.1:28234-31452[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.086 2.8e+02 3.8 0.0 22 43 236 259 222 262 0.76
2 5 5.6e-11 1.8e-07 33.2 0.6 1 44 268 313 268 315 0.96
3 5 2.4e-07 0.0008 21.5 0.1 2 43 323 368 322 371 0.96
4 5 1.4e-13 4.5e-10 41.5 0.0 1 45 377 422 377 423 0.96
5 5 1e-09 3.3e-06 29.1 0.2 4 46 433 475 430 475 0.95

Sequence Information

Coding Sequence
ATGAGTGAAGAAGAGGACAATCAGTCTTTAATAGATGAAATTCAGGCCTTAGAAAATGTATTAGATCAGAAACGAACTTTAGATGTTAACGAATATCCCAAGTCCAgtaaaacatcaaataaaaatgtattgggAAATGTGGAAACAAATctcaaaaaagaacaaaatggAATTAATGAACCTATGGATGTGGATGAAGAAATTgttaatgatgatgatgatgaataTGCAAATCATAGTTGTGatagtttacaagatttatttgaactcaataaaaaattaattggatTATTAGAACAATCTAGAGAAAAAGTGGAATCTCTTTTAGAAGAATGTATGAAAAAGAAGCGGTACATTGAAGATCAAATTTCTAAAACTGCTTCTTCTTGGCAGAGTAAAATAGTAAGCTTTAATGCTGGCATGCCTTATtttaaggataaaaattattattcagccAAAAGAAATGAAGATACagaagctaaaattaaaaatggagAGTTACGATTGGCTGAACTTCAACGTATTCATCGTTGGAGTCAAATAGATAAAAGTAATTTGTTAAAAGCTATAAGATATGAAGTCACATTAACTCTATTAAGGAAAGATGGACCTGatgaaatatatattgataattcCATCACTAAAACAAGTCAGTTACCAGTTGATGTCAAAAAAGCTATTGGATCACTAGGTTCTATGAAATTTGactggttaaaaatagctaatgATATTCCTGATAATAAACATTCTGCAGAAGAATGTGAAGTTATGTGGAATGTTTTTTTGCATCCtgatattaataaacaaagatGGACTTCAagagaagataaaaatttaaatcgtaTAGTAGAAGAATATGAATTTGAAGACTGGGATGGTATTGCCAAAGAATTAAAGACAAATCGTAGCGGTTATCAGTGTTTTGTTAggtataatacaaataattggaaaaatttaatgaaaggcCAATCATGGTCACCAGTAGATGACAAAACGCTTACTCATCTTGTACAAAGGCTCAAAATTGGAGATTATATTCCATGGGGATATATTGCAAGTTGCATGGGTAATTGGACAAAACAACAGatatattttcgATGGACCTACAGTTTAGCTCCTCATTTAAAGAAAGGAAGATTTTCAACAAAAGAAGATGAAACACTTTTATCTGCTGTGCAAAAGCATGGACCAAACTTCAGCAAAATATCAGCTTTAGAAATGAATAACAGGACAAATATACAACTAAAAGAACACTATCAGACACTTCAGGCAAGATGTaacgctgttaaaaaaatttggaatttacaAGAAGATGCCAGACTTCTTGAACTCCAACAAAAGTATGGCTGTAATTGGGcaaaaattataacagaatTGCCTGGTACTACTAGGATACAAGCTAGGCATCGTTATGCTACTCTTTTGCGTTTTCATCGAAAAGGTATTGgtttagaaaatattagtaGGACGCAATTAGATCCATTGTTAGATCATACTACAATGACTTACACCAGTAATTCTCCTTGGTCTGAATTACTTAAGACTTTACCATCTGATAAATATGTATCAGAATACATTGGAGAAGATGTGGAGTGTCAATTTGGAAAATTACAGAAAGCTATAACAAAAAAGGATTCAATAAgaccaaataaaatatattcattaaagtGTAAACCATTTGCTAACACAGTTTTATTCTGTGATGATAATGAAGAAATTTATCAGGAAGCAAGTactttatCAACAACTacagattttattgaaaataaatactatGACTGGGAATCGAATAAAATGATTACTAGCAATTCtccaaaagaaaaagtaatattagAAGGTGTGCCTATACAAATAATAGAACCATCTAGAACAACACTCCAAGCATATCAAGAACTTTTGCTGATTACCGCAAGTTTTCCTTCTACTTCTTttgaacaaaaacaaaattataaactaactCTTAGAGGACGAGATGCTTTAAGTTTGTTCAAACGACGTTATGAACAGTTATTTCATATGCCAACTGGTTTATGTAGAATAATACCACCTGACATAGTGGACGAAAGTGCATTTTTACCTGcactagaaaaattaaaaaagaagaaactgaaacttaaaaataaaaaaaagaaatatttaaatactgtgAAAGAATGTGTAAATACTTCATAA
Protein Sequence
MSEEEDNQSLIDEIQALENVLDQKRTLDVNEYPKSSKTSNKNVLGNVETNLKKEQNGINEPMDVDEEIVNDDDDEYANHSCDSLQDLFELNKKLIGLLEQSREKVESLLEECMKKKRYIEDQISKTASSWQSKIVSFNAGMPYFKDKNYYSAKRNEDTEAKIKNGELRLAELQRIHRWSQIDKSNLLKAIRYEVTLTLLRKDGPDEIYIDNSITKTSQLPVDVKKAIGSLGSMKFDWLKIANDIPDNKHSAEECEVMWNVFLHPDINKQRWTSREDKNLNRIVEEYEFEDWDGIAKELKTNRSGYQCFVRYNTNNWKNLMKGQSWSPVDDKTLTHLVQRLKIGDYIPWGYIASCMGNWTKQQIYFRWTYSLAPHLKKGRFSTKEDETLLSAVQKHGPNFSKISALEMNNRTNIQLKEHYQTLQARCNAVKKIWNLQEDARLLELQQKYGCNWAKIITELPGTTRIQARHRYATLLRFHRKGIGLENISRTQLDPLLDHTTMTYTSNSPWSELLKTLPSDKYVSEYIGEDVECQFGKLQKAITKKDSIRPNKIYSLKCKPFANTVLFCDDNEEIYQEASTLSTTTDFIENKYYDWESNKMITSNSPKEKVILEGVPIQIIEPSRTTLQAYQELLLITASFPSTSFEQKQNYKLTLRGRDALSLFKRRYEQLFHMPTGLCRIIPPDIVDESAFLPALEKLKKKKLKLKNKKKKYLNTVKECVNTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692849;
90% Identity
-
80% Identity
-